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Carm_scaffold_0_prodigal-single.1__X__X__00008
Bact-VirCarm_scaffold_0_prodigal-single.1__X__X__00008
Identity
- Kingdom:
- phage
Quality
87.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-126
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.74 | 31.0 | 4.32e-01 | 85.5% | 80.0% |
| 1r6vA02 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.65 | 36.0 | 4.35e-01 | 70.2% | 84.6% |
| 2mzjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 41.0 | 4.83e-01 | 71.8% | 100.0% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.62 | 31.0 | 2.79e-01 | 87.9% | 34.3% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.60 | 39.0 | 3.14e-01 | 92.7% | 35.9% |
| 2jx2A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 39.0 | 4.45e-01 | 71.8% | 100.0% |
| 3rnrB00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.57 | 47.0 | 3.92e-01 | 88.7% | 68.7% |
| 1w1wA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 42.0 | 3.23e-01 | 87.1% | 35.0% |
| 1kv3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 37.0 | 3.82e-01 | 79.0% | 70.9% |
| 3lqmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 31.0 | 3.39e-01 | 80.6% | 64.7% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.45e-01 | 89.5% | 38.4% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 37.0 | 3.47e-01 | 71.8% | 89.8% |
| 2wllA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.52 | 36.0 | 3.48e-01 | 80.6% | 62.1% |
| 4jocA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 43.0 | 3.14e-01 | 91.1% | 94.4% |
| 6qm7A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 43.0 | 3.49e-01 | 91.1% | 48.8% |
| 1e69A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 3.14e-01 | 89.5% | 38.8% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4112187 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.70 | 38.0 | 4.96e-01 | 73.4% | 95.7% |
| 4979169 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 46.0 | 4.88e-01 | 70.2% | 78.2% |
| 4009799 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.67 | 29.0 | 3.18e-01 | 84.7% | 47.6% |
| 4992013 | 304.4.1.80 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF790 | 0.65 | 49.0 | 4.71e-01 | 79.8% | 70.0% |
| 5018160 | 304.5.1.31 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF790 | 0.64 | 48.0 | 5.23e-01 | 79.8% | 97.0% |
| 3788749 | 6109.1.1.0 ↗ | a+b two layers › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 | 0.64 | 46.0 | 4.30e-01 | 91.1% | 60.7% |
| 5008116 | 304.24.1.39 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 | 0.63 | 46.0 | 5.17e-01 | 79.8% | 100.0% |
| 5071626 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 46.0 | 3.80e-01 | 80.6% | 63.2% |
| 4597970 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 46.0 | 3.23e-01 | 87.1% | 27.8% |
| 4040888 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.58 | 45.0 | 3.22e-01 | 87.1% | 28.1% |
| 4595400 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.58 | 45.0 | 3.16e-01 | 86.3% | 26.9% |
| None | — | 0.58 | 45.0 | 3.19e-01 | 87.1% | 27.7% | |
| None | — | 0.58 | 45.0 | 3.29e-01 | 87.1% | 30.5% | |
| 4568817 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.57 | 44.0 | 3.16e-01 | 87.1% | 27.7% |
| 4217811 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.57 | 44.0 | 3.10e-01 | 86.3% | 26.2% |
| 4028906 | 1116.1.1.0 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain | 0.57 | 46.0 | 4.05e-01 | 87.9% | 60.5% |
| 4230998 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.56 | 44.0 | 3.05e-01 | 87.1% | 25.2% |
| 4485211 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.56 | 43.0 | 3.07e-01 | 87.1% | 27.3% |
| 4954892 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.56 | 43.0 | 3.13e-01 | 87.1% | 29.0% |
| 3177434 | 304.9.1.133 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1, PF28224 | 0.55 | 42.0 | 4.33e-01 | 82.3% | 83.3% |
| 3935636 | 210.1.4.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › (Glycosyl)asparaginase › Asparaginase_2 | 0.55 | 45.0 | 3.35e-01 | 87.9% | 38.4% |
| 4009284 | 2004.1.1.478 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15, AAA_21 | 0.55 | 43.0 | 3.09e-01 | 89.5% | 28.7% |
| 4204450 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.55 | 42.0 | 3.06e-01 | 89.5% | 28.3% |
| 3837815 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.55 | 45.0 | 2.85e-01 | 89.5% | 17.1% |
| 3215447 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.54 | 45.0 | 3.19e-01 | 89.5% | 91.4% |
| 3978431 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.54 | 40.0 | 3.19e-01 | 75.8% | 60.0% |
| 4160544 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 34.0 | 3.26e-01 | 90.3% | 52.7% |
| 3464768 | 2004.1.1.481 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 | 0.54 | 44.0 | 4.02e-01 | 88.7% | 68.6% |
| 4063927 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.54 | 45.0 | 3.90e-01 | 90.3% | 90.0% |
| 3412171 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.54 | 45.0 | 2.90e-01 | 89.5% | 20.0% |
| 4030051 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.54 | 44.0 | 3.11e-01 | 88.7% | 29.2% |
| 3617645 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.53 | 43.0 | 2.55e-01 | 89.5% | 10.5% |
| 3607721 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.50 | 42.0 | 3.66e-01 | 90.3% | 60.0% |