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Carm_scaffold_0_prodigal-single.1__X__X__00124
Bact-VirCarm_scaffold_0_prodigal-single.1__X__X__00124
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-108
Domain cluster:
rep: MW879341.1__QXO10940.1__pEaSNUABM54_00114__00114__D183-275
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oelB00 | 2.40.50.170 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C | 0.63 | 31.0 | 3.52e-01 | 83.9% | 60.9% |
| 1xszA03 | 3.30.310.140 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › sec7 domains | 0.53 | 37.0 | 3.19e-01 | 100.0% | 43.9% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.52 | 36.0 | 3.69e-01 | 88.2% | 75.9% |
| 4f0qA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 44.0 | 3.58e-01 | 100.0% | 70.3% |
| 6p3qA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 44.0 | 3.73e-01 | 100.0% | 74.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4549698 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.61 | 40.0 | 4.01e-01 | 96.8% | 64.2% |
| 4043121 | 4.1.1.36 ↗ | beta barrels › SH3 › SH3 › SH3 › FeThRed_A | 0.59 | 41.0 | 4.58e-01 | 93.5% | 91.8% |
| 4937878 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.58 | 33.0 | 3.42e-01 | 76.3% | 60.0% |
| 3600113 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 49.0 | 3.74e-01 | 100.0% | 38.7% |
| 355233 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.57 | 34.0 | 3.69e-01 | 100.0% | 70.0% |
| 5005855 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.56 | 44.0 | 3.33e-01 | 98.9% | 34.7% |
| 5029179 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.55 | 39.0 | 3.69e-01 | 97.8% | 61.8% |
| 3427044 | 4.1.1.36 ↗ | beta barrels › SH3 › SH3 › SH3 › FeThRed_A | 0.53 | 41.0 | 4.19e-01 | 96.8% | 85.6% |
| 2938507 | 9.2.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg | 0.52 | 38.0 | 3.51e-01 | 96.8% | 59.5% |
| 3695262 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.51 | 38.0 | 2.67e-01 | 80.6% | 52.4% |