←Back to structures
Carm_scaffold_0_prodigal-single.1__X__X__00147
Bact-VirCarm_scaffold_0_prodigal-single.1__X__X__00147
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-129
Domain cluster:
rep: S2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00066__D1-122
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6fmeA03 | 2.20.220.10 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › alpha-Amylases | 0.65 | 31.0 | 4.36e-01 | 82.9% | 95.2% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 49.0 | 4.75e-01 | 92.2% | 78.6% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.59 | 42.0 | 3.46e-01 | 73.6% | 90.5% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 36.0 | 2.93e-01 | 91.5% | 36.7% |
| 4b0bB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 42.0 | 3.87e-01 | 90.7% | 86.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4093588 | 4194.1.1.2 ↗ | a+b duplicates or obligate multimers › Prenyltransferase-like › Prenyltransferase-like › Prenyltransferase-like › Trp_DMAT | 0.71 | 62.0 | 4.27e-01 | 94.6% | 50.2% |
| 4559420 | 4194.1.1.2 ↗ | a+b duplicates or obligate multimers › Prenyltransferase-like › Prenyltransferase-like › Prenyltransferase-like › Trp_DMAT | 0.70 | 61.0 | 4.27e-01 | 95.3% | 52.3% |
| 3894725 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.55 | 39.0 | 3.88e-01 | 92.2% | 68.9% |
| 3193258 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 49.0 | 3.70e-01 | 100.0% | 63.5% |
| 4584941 | 243.3.1.7 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Xylo_C | 0.54 | 40.0 | 3.91e-01 | 82.2% | 70.3% |
D2
medium
residues 130-230
Domain cluster:
rep: S2_012_000_R2_scaffold_18_prodigal-single.1__X__X__00066__D123-218
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b5lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 57.0 | 3.84e-01 | 97.0% | 61.0% |
| 3wa2X01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 46.0 | 4.97e-01 | 90.1% | 94.3% |
| 3rgaA02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 48.0 | 4.28e-01 | 89.1% | 92.6% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 38.0 | 3.23e-01 | 97.0% | 41.6% |
| 1ksiA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 49.0 | 5.01e-01 | 100.0% | 95.8% |
| 6grrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 48.0 | 4.82e-01 | 100.0% | 90.1% |
| 3zh5A00 | 2.40.128.710 | Mainly Beta › Beta Barrel › Lipocalin › Surface-adhesin protein E | 0.57 | 44.0 | 4.03e-01 | 90.1% | 62.9% |
| 1mg2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 51.0 | 3.38e-01 | 98.0% | 62.3% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 49.0 | 3.22e-01 | 98.0% | 83.5% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 49.0 | 3.33e-01 | 96.0% | 70.1% |
| 3loyA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 48.0 | 4.86e-01 | 98.0% | 95.0% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 48.0 | 3.18e-01 | 98.0% | 79.7% |
| 4o9dA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 48.0 | 3.21e-01 | 97.0% | 59.1% |
| 4pswA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 46.0 | 4.16e-01 | 90.1% | 86.5% |
| 2bnmA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 39.0 | 3.76e-01 | 77.2% | 96.7% |
| 1lj5A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 45.0 | 3.93e-01 | 92.1% | 97.4% |
| 1e2rA02 | 2.140.10.20 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 0.53 | 46.0 | 3.03e-01 | 96.0% | 33.8% |
| 2qe8A00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 47.0 | 3.26e-01 | 98.0% | 88.1% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 48.0 | 3.29e-01 | 98.0% | 63.2% |
| 2lf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 36.0 | 3.06e-01 | 96.0% | 42.3% |
| 3ehcB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 41.0 | 3.83e-01 | 87.1% | 95.3% |
| 1sefA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 36.0 | 3.40e-01 | 73.3% | 84.0% |
| 2x5rA01 | 3.30.470.40 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.50 | 39.0 | 3.83e-01 | 86.1% | 90.4% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5045201 | 5.1.4.663 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SBBP | 0.69 | 62.0 | 3.95e-01 | 97.0% | 71.1% |
| 4256745 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.62 | 40.0 | 3.62e-01 | 76.2% | 50.8% |
| 3849724 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.60 | 55.0 | 3.47e-01 | 99.0% | 79.0% |
| 5009568 | 243.5.1.1 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 | 0.59 | 49.0 | 5.06e-01 | 91.1% | 94.7% |
| 3399742 | 5.1.4.220 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd | 0.58 | 51.0 | 3.49e-01 | 94.1% | 54.4% |
| 3425035 | 243.1.1.122 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF28340 | 0.58 | 46.0 | 4.74e-01 | 84.2% | 100.0% |
| 3614174 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.58 | 51.0 | 3.29e-01 | 96.0% | 44.9% |
| 3366964 | 5.1.4.94 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Det1 | 0.58 | 51.0 | 3.60e-01 | 97.0% | 74.5% |
| 3311783 | 5.1.5.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FG-GAP_3 | 0.57 | 51.0 | 3.31e-01 | 98.0% | 48.0% |
| 3632043 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.57 | 49.0 | 4.91e-01 | 93.1% | 95.2% |
| 3705068 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.57 | 50.0 | 3.21e-01 | 97.0% | 51.9% |
| 3466830 | 5.1.4.257 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP, FG-GAP_3 | 0.57 | 50.0 | 3.26e-01 | 98.0% | 47.8% |
| 3219433 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.56 | 48.0 | 4.44e-01 | 90.1% | 89.6% |
| 2702181 | 5.1.4.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ,PQQ_2 | 0.56 | 52.0 | 3.33e-01 | 100.0% | 57.1% |
| 3219435 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.56 | 47.0 | 3.73e-01 | 90.1% | 59.3% |
| 3438347 | 5.1.5.63 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1618 | 0.55 | 49.0 | 4.40e-01 | 96.0% | 90.7% |
| 3219432 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.55 | 47.0 | 4.46e-01 | 91.1% | 95.0% |
| 3999839 | 5.1.5.73 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PEP5_VPS11_N | 0.55 | 48.0 | 3.26e-01 | 94.1% | 86.3% |
| 3565624 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 50.0 | 3.35e-01 | 98.0% | 73.2% |
| 3826506 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 48.0 | 3.41e-01 | 94.1% | 62.8% |
| 3592148 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.55 | 50.0 | 3.19e-01 | 98.0% | 60.7% |
| 4304368 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.55 | 49.0 | 3.27e-01 | 97.0% | 64.3% |
| 4929426 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 48.0 | 3.02e-01 | 97.0% | 61.5% |
| 4301874 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.54 | 49.0 | 3.30e-01 | 99.0% | 62.1% |
| 3434352 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 47.0 | 3.40e-01 | 96.0% | 42.4% |
| 3505900 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 46.0 | 4.62e-01 | 93.1% | 100.0% |
| 5057039 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 38.0 | 4.27e-01 | 82.2% | 97.4% |
| 3810779 | 243.3.1.45 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › TIN1 | 0.53 | 41.0 | 4.07e-01 | 81.2% | 99.0% |
| 3665649 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.53 | 39.0 | 3.81e-01 | 92.1% | 70.6% |
| 3895948 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.53 | 44.0 | 4.32e-01 | 91.1% | 94.5% |
| 195810 | 5.1.3.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP | 0.53 | 47.0 | 3.26e-01 | 98.0% | 88.1% |
| 3344355 | 5.1.4.227 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_At4g14310 | 0.53 | 47.0 | 3.08e-01 | 98.0% | 37.1% |
| 3517310 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 44.0 | 4.32e-01 | 93.1% | 98.2% |
| 3208374 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 41.0 | 3.65e-01 | 83.2% | 60.7% |
| 3718120 | 246.2.1.8 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › PhoD | 0.52 | 44.0 | 2.89e-01 | 93.1% | 95.2% |
| 4965152 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.50 | 37.0 | 3.46e-01 | 92.1% | 61.2% |
| 3816629 | 804.1.1.3 ↗ | a+b four layers › Hypothetical protein YwqG › Hypothetical protein YwqG › Hypothetical protein YwqG › PDCD2_C, PF30657 | 0.50 | 43.0 | 3.33e-01 | 97.0% | 98.8% |
| 3972573 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.50 | 35.0 | 3.40e-01 | 92.1% | 63.5% |