←Back to structures
Carm_scaffold_0_prodigal-single.1__X__X__00158
Bact-VirCarm_scaffold_0_prodigal-single.1__X__X__00158
Identity
- Kingdom:
- phage
Quality
69.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-138
Domain cluster:
rep: NC_007623.1__YP_418148.1__PPEV_gp115__00115__D16-134
D2
high
residues 196-249
Domain cluster:
rep: AY766464.1__AAX13237.1__X__00053__D61-103
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 45.0 | 3.52e-01 | 72.2% | 68.7% |
| 3i2vA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.54 | 37.0 | 2.87e-01 | 72.2% | 71.8% |
| 6muwN00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 40.0 | 2.65e-01 | 81.5% | 28.6% |
| 3bm4A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 42.0 | 2.97e-01 | 96.3% | 69.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285508 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 48.0 | 2.67e-01 | 74.1% | 8.1% |
| 4319962 | 2007.12.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Beta-D-glucan exohydrolase, C-terminal domain › Beta-D-glucan exohydrolase, C-terminal domain › Glyco_hydro_3_C | 0.69 | 50.0 | 3.06e-01 | 77.8% | 21.0% |
| 2417914 | 1083.1.1.0 ↗ | a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units | 0.63 | 54.0 | 3.97e-01 | 100.0% | 69.3% |
| 4888789 | 1083.1.1.1 ↗ | a+b duplicates or obligate multimers › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › Phage T4 gp12 N-terminal repeating units › gp12-short_mid | 0.62 | 51.0 | 3.31e-01 | 98.1% | 26.2% |
| 3742225 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.62 | 47.0 | 2.92e-01 | 83.3% | 55.2% |
| 4303869 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.59 | 42.0 | 3.54e-01 | 75.9% | 84.4% |