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ChaB
Euk-VirEpinotia_aporema_granulovirus
ChaB__YP_006908598__Epinotia_aporema_granulovirus__166056
Identity
- Accession:
- YP_006908598 ↗
- Protein ID:
- ChaB
- Kingdom:
- euk
Quality
73.6
mean pLDDT
Taxonomy
TaxID: 166056
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-57
Domain cluster:
rep: ChaB2__YP_010087102__Spodoptera_eridania_nucleopolyhedrovirus__2315721__D11-61
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06150.18 best | ChaB | 30.8 | 5.10e-07 | 94.3% | 95.0% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sg7A00 | 1.10.1740.70 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB | 0.89 | 81.0 | 7.13e-01 | 100.0% | 92.0% |
| 2kptA00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.77 | 59.0 | 4.20e-01 | 81.1% | 50.0% |
| 3jrqA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.68 | 57.0 | 3.62e-01 | 92.5% | 48.0% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.65 | 49.0 | 4.88e-01 | 83.0% | 98.2% |
| 1eljA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.63 | 53.0 | 3.71e-01 | 100.0% | 76.8% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.61 | 48.0 | 3.79e-01 | 92.5% | 77.4% |
| 7wu8B01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.61 | 49.0 | 4.40e-01 | 92.5% | 63.3% |
| 3vkgA14 | 6.10.140.1060 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 42.0 | 3.73e-01 | 77.4% | 50.0% |
| 1m56C01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 41.0 | 3.79e-01 | 73.6% | 79.7% |
| 1o9gA02 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 43.0 | 4.65e-01 | 79.2% | 100.0% |
| 2or0B01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 40.0 | 3.23e-01 | 79.2% | 49.2% |
| 4m7oA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.57 | 42.0 | 3.35e-01 | 84.9% | 84.0% |
| 3nwzB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 44.0 | 3.20e-01 | 86.8% | 41.1% |
| 4a15A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 39.0 | 2.78e-01 | 79.2% | 85.9% |
| 3ptjA00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.54 | 42.0 | 3.24e-01 | 98.1% | 55.6% |
| 3c7jA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.40e-01 | 83.0% | 93.4% |
| 4v1sA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.52 | 42.0 | 2.68e-01 | 100.0% | 77.4% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 36.0 | 3.37e-01 | 79.2% | 58.1% |
| 2ix5A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.50 | 40.0 | 3.14e-01 | 96.2% | 59.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3575 | 4084.1.1.1 ↗ | alpha bundles › ChaB-like › ChaB-like › ChaB-like › ChaB | 0.89 | 81.0 | 7.13e-01 | 100.0% | 92.0% |
| 4957076 | 101.1.9.134 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 | 0.66 | 52.0 | 5.09e-01 | 94.3% | 80.0% |
| 3473556 | 592.1.1.7 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PF26091 | 0.65 | 51.0 | 4.68e-01 | 86.8% | 71.4% |
| 4019654 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.65 | 46.0 | 2.97e-01 | 77.4% | 69.1% |
| 5024287 | 103.5.1.11 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF2067 | 0.63 | 51.0 | 4.62e-01 | 94.3% | 65.3% |
| 3687813 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.62 | 50.0 | 3.23e-01 | 98.1% | 51.1% |
| 3438405 | 386.1.1.310 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF1677 | 0.62 | 48.0 | 4.45e-01 | 98.1% | 65.2% |
| 3883903 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.61 | 44.0 | 3.02e-01 | 77.4% | 35.5% |
| 3391283 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.60 | 46.0 | 2.97e-01 | 86.8% | 81.8% |
| 3948449 | 639.1.1.1 ↗ | alpha arrays › HHA-like › Hemolysin expression modulating protein HHA › Hemolysin expression modulating protein HHA › HHA | 0.59 | 43.0 | 3.89e-01 | 75.5% | 77.0% |
| 3228384 | 544.1.1.0 ↗ | alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 | 0.59 | 46.0 | 3.80e-01 | 96.2% | 78.8% |
| 3857011 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.58 | 41.0 | 3.21e-01 | 77.4% | 40.8% |
| 4511344 | 304.34.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases › NDK | 0.57 | 44.0 | 3.39e-01 | 92.5% | 75.9% |
| 3519294 | 101.1.2.125 ↗ | alpha arrays › HTH › HTH › winged helix domain › ELL | 0.57 | 41.0 | 3.46e-01 | 90.6% | 45.6% |
| 3397297 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.56 | 39.0 | 2.96e-01 | 75.5% | 27.6% |
| 3879122 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 45.0 | 3.50e-01 | 98.1% | 51.5% |
| 3654127 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.52 | 37.0 | 2.68e-01 | 81.1% | 23.3% |
| 3751836 | 3134.1.1.1 ↗ | a+b two layers › N-terminal domain of DC-UbP › N-terminal domain of DC-UbP › N-terminal domain of DC-UbP › UBD | 0.52 | 44.0 | 3.75e-01 | 94.3% | 68.2% |
| 3272872 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 40.0 | 2.45e-01 | 88.7% | 49.1% |