←Back to structures
Chitinase
Euk-VirPerigonia_lusca_single_nucleopolyhedrovirus
Chitinase__YP_009165660__Perigonia_lusca_single_nucleopolyhedrovirus__1675865
Identity
- Accession:
- YP_009165660 ↗
- Protein ID:
- Chitinase
- Kingdom:
- euk
Quality
76.5
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Perigonia_lusca_single_nucleopolyhedrovirus
TaxID: 1675865
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-124
Domain cluster:
rep: chitinase__YP_009116977__Pseudoplusia_includens_SNPV_IE__1592335__D28-126
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08329.17 best | ChitinaseA_N | 128.2 | 2.20e-37 | 100.0% | 76.7% |
D2
medium
residues 145-362
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00704.35 best | Glyco_hydro_18 | 129.7 | 2.80e-37 | 96.8% | 49.2% |
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fndA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.88 | 60.0 | 5.55e-01 | 98.2% | 56.6% |
| 1ctnA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.87 | 84.0 | 6.91e-01 | 100.0% | 61.1% |
| 1d2kA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.85 | 69.0 | 5.86e-01 | 98.2% | 55.3% |
| 3qokA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.84 | 67.0 | 5.95e-01 | 97.7% | 59.9% |
| 1itxA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.81 | 78.0 | 6.50e-01 | 99.5% | 64.2% |
| 3oa5B02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.79 | 76.0 | 6.15e-01 | 100.0% | 63.1% |
| 2y8vA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.78 | 57.0 | 5.31e-01 | 98.2% | 61.7% |
| 1kfwA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.77 | 73.0 | 5.96e-01 | 99.1% | 62.9% |
| 4v2xA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.70 | 59.0 | 5.07e-01 | 98.6% | 57.5% |
| 2ddxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.70 | 50.0 | 4.35e-01 | 98.2% | 49.1% |
| 4yztA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.70 | 56.0 | 4.89e-01 | 98.6% | 57.6% |
| 3zr5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 54.0 | 4.80e-01 | 97.2% | 58.6% |
| 3ndzA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.68 | 58.0 | 4.91e-01 | 98.2% | 55.9% |
| 2jepB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 58.0 | 4.84e-01 | 98.6% | 54.4% |
| 2wnwA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 59.0 | 5.01e-01 | 98.2% | 59.6% |
| 1a5aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 45.0 | 4.27e-01 | 99.1% | 58.4% |
| 3qr3A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.65 | 55.0 | 4.76e-01 | 98.6% | 59.3% |
| 1knwA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.65 | 53.0 | 5.10e-01 | 99.1% | 76.3% |
| 4b3lA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 60.0 | 4.62e-01 | 99.5% | 68.8% |
| 7jpjB01 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.63 | 50.0 | 4.85e-01 | 97.2% | 73.6% |
| 2jieA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 58.0 | 4.52e-01 | 100.0% | 54.2% |
| 5e97A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 51.0 | 4.86e-01 | 100.0% | 74.6% |
| 8d89A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 58.0 | 4.74e-01 | 99.5% | 61.1% |
| 2qw5A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.61 | 50.0 | 4.34e-01 | 99.1% | 56.6% |
| 1vk3A03 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.61 | 35.0 | 4.11e-01 | 93.6% | 80.3% |
| 1tufA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.61 | 51.0 | 4.81e-01 | 96.8% | 73.8% |
| 1b1yA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 56.0 | 4.20e-01 | 97.7% | 75.0% |
| 3nzpB02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.60 | 49.0 | 4.64e-01 | 98.2% | 71.6% |
| 5vakA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 55.0 | 4.28e-01 | 98.2% | 78.8% |
| 6uqyB01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 53.0 | 4.88e-01 | 95.0% | 82.0% |
| 3n2oA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.59 | 52.0 | 4.73e-01 | 98.2% | 72.0% |
| 4cczA01 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.58 | 52.0 | 4.58e-01 | 99.1% | 66.2% |
| 2q09A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 46.0 | 4.16e-01 | 99.5% | 60.9% |
| 3qw3A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 45.0 | 4.30e-01 | 99.1% | 70.3% |
| 1a0cA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.57 | 53.0 | 4.21e-01 | 100.0% | 56.8% |
| 1kwgA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 52.0 | 4.27e-01 | 100.0% | 81.5% |
| 7wkqB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 41.0 | 4.25e-01 | 95.4% | 79.8% |
| 3aw9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 38.0 | 4.07e-01 | 94.5% | 77.3% |
| 8a26A01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.56 | 50.0 | 4.60e-01 | 95.0% | 75.0% |
| 2r8wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 42.0 | 3.77e-01 | 100.0% | 56.9% |
| 4xvhA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.54 | 46.0 | 4.61e-01 | 100.0% | 86.9% |
| 3paoB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 46.0 | 4.05e-01 | 100.0% | 61.8% |
| 3v3tA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.54 | 39.0 | 4.05e-01 | 100.0% | 78.5% |
| 4dnhA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 49.0 | 4.03e-01 | 100.0% | 55.2% |
| 3itlD00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 49.0 | 3.93e-01 | 100.0% | 51.1% |
| 3ntvA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 38.0 | 3.94e-01 | 95.0% | 77.1% |
| 3iv3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 48.0 | 4.22e-01 | 99.5% | 75.6% |
| 2yxoB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 45.0 | 4.24e-01 | 98.2% | 75.5% |
| 3epnB01 | 3.20.20.540 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Radical SAM ThiC family, central domain | 0.52 | 48.0 | 4.31e-01 | 100.0% | 76.1% |
| 3regA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 37.0 | 4.20e-01 | 95.9% | 93.6% |
| 3e48A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 37.0 | 3.97e-01 | 93.1% | 85.8% |
| 6vloD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 41.0 | 4.20e-01 | 94.0% | 86.7% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 41.0 | 4.15e-01 | 97.2% | 87.2% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3216871 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.91 | 69.0 | 5.73e-01 | 99.5% | 48.0% |
| 3409803 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.88 | 64.0 | 5.26e-01 | 98.6% | 45.1% |
| 3893084 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.88 | 67.0 | 7.31e-01 | 98.6% | 91.4% |
| 4021602 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.88 | 66.0 | 5.44e-01 | 99.1% | 46.8% |
| 1240830 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.88 | 59.0 | 5.78e-01 | 97.2% | 62.9% |
| 1097799 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.88 | 84.0 | 7.14e-01 | 100.0% | 65.8% |
| None | — | 0.87 | 84.0 | 7.24e-01 | 100.0% | 69.8% | |
| 3785858 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.87 | 66.0 | 5.38e-01 | 98.2% | 46.0% |
| None | — | 0.86 | 84.0 | 7.19e-01 | 100.0% | 69.3% | |
| 2417369 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.85 | 62.0 | 6.03e-01 | 97.2% | 68.8% |
| 3942756 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.84 | 68.0 | 5.47e-01 | 98.6% | 47.4% |
| 4020619 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.84 | 69.0 | 5.42e-01 | 98.6% | 44.7% |
| 4883687 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.84 | 79.0 | 7.04e-01 | 98.2% | 75.3% |
| 4534862 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.82 | 79.0 | 5.78e-01 | 100.0% | 51.1% |
| 4353352 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.81 | 78.0 | 6.13e-01 | 99.5% | 54.1% |
| 3417716 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.80 | 61.0 | 5.32e-01 | 98.6% | 54.3% |
| 4459345 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.79 | 70.0 | 5.49e-01 | 99.1% | 49.1% |
| 3205440 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.78 | 60.0 | 4.94e-01 | 98.2% | 46.8% |
| 3099008 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.77 | 72.0 | 6.44e-01 | 98.2% | 72.8% |
| 1501391 | 2002.1.1.8 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase | 0.70 | 59.0 | 5.08e-01 | 98.6% | 57.7% |
| 3957683 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.62 | 30.0 | 3.53e-01 | 90.4% | 65.1% |
| 4961012 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.60 | 48.0 | 4.56e-01 | 98.2% | 70.6% |
| 2546511 | 2002.1.1.101 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N | 0.60 | 50.0 | 4.74e-01 | 98.2% | 74.8% |
| 5039931 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.59 | 36.0 | 3.85e-01 | 89.9% | 67.9% |
| 4600940 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.59 | 48.0 | 3.91e-01 | 100.0% | 48.1% |
| 4859786 | 2002.1.1.51 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha_L_fucos | 0.58 | 52.0 | 4.56e-01 | 98.2% | 65.8% |
| 3975614 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.58 | 47.0 | 4.04e-01 | 100.0% | 54.4% |
| 4605011 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.58 | 47.0 | 3.81e-01 | 100.0% | 45.7% |
| 4589928 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 52.0 | 4.34e-01 | 97.7% | 78.9% |
| 4114431 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.58 | 47.0 | 3.77e-01 | 100.0% | 45.5% |
| 3650487 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 53.0 | 4.89e-01 | 99.5% | 85.4% |
| 3931645 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.58 | 52.0 | 4.94e-01 | 98.6% | 81.8% |
| 3247717 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.57 | 51.0 | 4.88e-01 | 99.1% | 82.4% |
| 4024269 | 7512.1.1.54 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 | 0.57 | 33.0 | 3.69e-01 | 94.5% | 70.6% |
| 4578096 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.56 | 51.0 | 4.61e-01 | 95.9% | 74.7% |
| 5055199 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.56 | 41.0 | 4.49e-01 | 93.6% | 91.6% |
| 4019103 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 51.0 | 4.96e-01 | 99.5% | 96.7% |
| 4244243 | 2002.1.1.205 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,CofH_C | 0.55 | 50.0 | 4.12e-01 | 98.2% | 71.2% |
| 4168947 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.54 | 47.0 | 3.98e-01 | 100.0% | 56.1% |
| 5007176 | 7523.1.1.22 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 | 0.54 | 28.0 | 3.82e-01 | 81.7% | 94.8% |
| 5013854 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.53 | 26.0 | 3.62e-01 | 78.9% | 94.3% |
| 3737089 | 2484.1.1.57 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt | 0.52 | 33.0 | 3.38e-01 | 96.8% | 61.4% |
| 3206677 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.52 | 37.0 | 3.46e-01 | 72.5% | 81.8% |
| 3915031 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.52 | 39.0 | 4.02e-01 | 98.6% | 80.0% |
| 2596867 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 46.0 | 4.41e-01 | 95.9% | 93.4% |
| 4944511 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 47.0 | 4.19e-01 | 98.2% | 80.3% |
| 3178498 | 2484.1.1.57 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt | 0.51 | 35.0 | 3.18e-01 | 96.8% | 49.8% |
| 3388917 | 2002.1.1.114 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_85 | 0.50 | 47.0 | 3.99e-01 | 100.0% | 81.4% |
| 3388478 | 2007.9.1.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › PF29907 | 0.50 | 39.0 | 4.22e-01 | 95.0% | 93.2% |
D3
medium
residues 363-427
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00704.35 best | Glyco_hydro_18 | 41.4 | 2.10e-10 | 100.0% | 16.7% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ctnA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.89 | 84.0 | 5.08e-01 | 100.0% | 18.3% |
| 3alfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.79 | 71.0 | 4.61e-01 | 100.0% | 23.7% |
| 5xd7A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 39.0 | 2.75e-01 | 100.0% | 20.7% |
| 2g3aA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 37.0 | 3.27e-01 | 78.5% | 59.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.90 | 84.0 | 5.22e-01 | 100.0% | 20.9% | |
| None | — | 0.87 | 80.0 | 4.99e-01 | 100.0% | 21.8% | |
| 3228366 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.84 | 77.0 | 4.90e-01 | 100.0% | 24.1% |
| 2142057 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.82 | 75.0 | 4.93e-01 | 100.0% | 26.0% |
| 3624689 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.81 | 73.0 | 4.61e-01 | 100.0% | 22.3% |
| 5083235 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.54 | 39.0 | 2.86e-01 | 100.0% | 27.9% |
D4
medium
residues 428-553
Domain cluster:
rep: IMGVR_UViG_3300010428_000133-3300010428-Ga0134103_100387811__D748-828
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00704.35 best | Glyco_hydro_18 | 83.6 | 3.00e-23 | 88.1% | 31.2% |