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CrmB_or_CPXV005_protein

Euk-Vir

Cowpox_virus

CrmB_or_CPXV005_protein__NP_619793__Cowpox_virus__10243

Identity

Accession:
NP_619793 ↗
Protein ID:
CrmB_or_CPXV005_protein
Kingdom:
euk

Quality

76.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Cowpox_virus

TaxID: 10243

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-85
PDB
Domain cluster: rep: membrane_protein_ORF124__YP_003358263__Anguillid_herpesvirus_1__150286__D22-79
D2 high residues 178-324
PDB
Domain cluster: rep: Viral_TNFR_II-like_c-terminal_fragment__YP_227393__Deerpox_virus_W-848-83__305674__D31-193
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07190.17 best CrmD_SECRET 64.8 1.40e-17 99.3% 77.9%
D3 medium residues 94-129
PDB
Domain cluster: rep: cytokine_response-modifying_protein_B__YP_009329613__BeAn_58058_virus__67082__D89-123
D4 medium residues 137-170
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kgqD02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.88 78.0 5.85e-01 100.0% 43.8%
3me4B01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.73 60.0 4.70e-01 100.0% 43.8%
6faxR01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.69 55.0 5.07e-01 100.0% 70.0%
1mppA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.52 35.0 2.33e-01 70.6% 13.7%