Cy100

Euk-Vir

Cynomolgus_cytomegalovirus

Cy100__YP_009337509__Cynomolgus_cytomegalovirus__1919083

Identity

86.6 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Cynomolgus_cytomegalovirus

TaxID: 1919083

View cluster (58 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 346-429

PDB

Domain cluster: rep: helicase_primase_complex_protein__NP_042936__Human_betaherpesvirus_6A__32603__D343-410

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1aoaA01	1.10.418.10	Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain	0.60	47.0	4.26e-01	86.9%	89.0%
1dp7P00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.57	37.0	3.82e-01	100.0%	71.1%
2v8qA01	3.30.310.80	Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1	0.55	37.0	3.71e-01	95.2%	66.3%
1y0bB01	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.52	40.0	3.12e-01	83.3%	78.7%
1xexB00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.50	36.0	2.99e-01	77.4%	53.4%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4982249	331.3.1.0 ↗	a+b two layers › TBP-like › Bet v1-like › Bet v1-like	0.56	38.0	3.76e-01	94.0%	63.2%
4257906	103.2.1.2 ↗	alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone	0.53	38.0	3.79e-01	76.2%	90.0%
4633797	3018.1.1.0 ↗	a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like	0.51	34.0	3.47e-01	88.1%	70.0%
4933807	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.50	31.0	3.18e-01	91.7%	61.2%

D2 high residues 765-905

PDB

Domain cluster: rep: helicase-primase_primase_subunit__NP_944382__Psittacid_alphaherpesvirus_1__50294__D1138-1286

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03121.21 best	Herpes_UL52	80.6	8.60e-23	54.6%	96.0%

D3 medium residues 1-145

PDB

Domain cluster: rep: helicase-primase_primase_subunit__YP_010085930__Wood_mouse_herpesvirus__432370__D12-162

D4 medium residues 146-249

PDB

Domain cluster: rep: helicase_primase_complex__NP_050224__Human_betaherpesvirus_6B__32604__D142-241

D5 medium residues 250-309

PDB

Domain cluster: rep: protein_UL70__YP_004933833__Cynomolgus_macaque_cytomegalovirus_strain_Ottawa__944969__D246-322

D6 medium residues 452-539_599-622_673-704

PDB

Domain cluster: rep: UL70__YP_009137475__Papio_ursinus_cytomegalovirus__1667587__D455-502_644-677_692-712