Cy123

Euk-Vir

Cynomolgus_cytomegalovirus

Cy123__YP_009337528__Cynomolgus_cytomegalovirus__1919083

Identity

79.3 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Cynomolgus_cytomegalovirus

TaxID: 1919083

View cluster (21 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-171

PDB

Domain cluster: rep: tegument_protein_UL88__YP_002608280__Human_herpesvirus_5__10359__D21-114_139-191

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04529.18 best	Herpes_U59	240.0	6.10e-71	100.0%	40.8%

D2 medium residues 188-209_255-400

PDB

Domain cluster: rep: tegument_protein_UL88__YP_007969786__Elephantid_betaherpesvirus_1__146015__D138-346

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04529.18 best	Herpes_U59	201.5	3.10e-59	92.9%	39.7%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3zh9B03	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.61	33.0	3.75e-01	81.0%	68.3%
2e9xB02	1.20.58.1020	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.57	31.0	3.73e-01	98.2%	78.9%
1w5sA01	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.53	27.0	3.56e-01	98.2%	90.9%
2a6hF01	1.20.120.1810	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.53	42.0	4.14e-01	85.1%	81.4%
1nu7D02	1.20.120.760	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle, domain 2	0.53	31.0	3.56e-01	83.3%	76.6%
2wzkA03	1.20.1310.10	Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats	0.52	31.0	3.82e-01	98.8%	90.0%