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Cy64
Euk-VirCynomolgus_cytomegalovirus
Cy64__YP_009337488__Cynomolgus_cytomegalovirus__1919083
Identity
- Accession:
- YP_009337488 ↗
- Protein ID:
- Cy64
- Kingdom:
- euk
Quality
79.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Cynomolgus_cytomegalovirus
TaxID: 1919083
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-141
Domain cluster:
rep: gp3__YP_007417792__Caviid_betaherpesvirus_2__33706__D377-544
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02393.22 best | US22 | 49.1 | 8.20e-13 | 86.7% | 88.7% |
D2
medium
residues 142-233
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6lpfA01 | 1.10.730.20 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › | 0.53 | 44.0 | 3.66e-01 | 90.2% | 92.0% |
| 6g28A00 | 1.10.4080.10 | Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 | 0.50 | 41.0 | 2.80e-01 | 91.3% | 49.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4020389 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.63 | 49.0 | 3.08e-01 | 84.8% | 74.8% |
| 4385262 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.55 | 45.0 | 2.92e-01 | 93.5% | 79.1% |
| 3559290 | 389.1.1.119 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › BRINP | 0.51 | 41.0 | 3.62e-01 | 84.8% | 66.2% |
| 4024444 | 5068.1.1.1 ↗ | alpha bundles › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Cytochrom_B_C | 0.51 | 40.0 | 3.68e-01 | 100.0% | 64.0% |
| 4298085 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.50 | 36.0 | 2.92e-01 | 75.0% | 63.9% |