Cy83

Euk-Vir

Cynomolgus_cytomegalovirus

Cy83__YP_009337502__Cynomolgus_cytomegalovirus__1919083

Identity

82.2 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Cynomolgus_cytomegalovirus

TaxID: 1919083

View cluster (76 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 115-249

PDB

Domain cluster: rep: DNA_cleavage_packaging_protein__YP_009207093__Hawaiian_green_turtle_herpesvirus__70564__D1-103_380-397

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01673.24 best	Herpes_env	133.3	1.90e-38	97.0%	24.5%

D2 medium residues 283-371_456-474

PDB

Domain cluster: rep: ORF62__NP_733916__Callitrichine_gammaherpesvirus_3__106331__D255-347

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01673.24 best	Herpes_env	52.4	6.20e-14	59.3%	8.9%

D3 medium residues 372-455

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01673.24 best	Herpes_env	56.6	3.20e-15	100.0%	11.3%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4r8zA00	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.73	45.0	3.30e-01	100.0%	24.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3225554	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.54	38.0	3.66e-01	98.8%	64.2%

D4 medium residues 475-552

PDB

Domain cluster: rep: DNA_packaging_protein_UL32__YP_009042094__Fruit_bat_alphaherpesvirus_1__1343901__D516-583

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01673.24 best	Herpes_env	82.9	3.50e-23	100.0%	14.0%