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Cytochrome_P450

Euk-Vir

Pandoravirus_neocaledonia

Cytochrome_P450__YP_009482017__Pandoravirus_neocaledonia__2107708

Identity

Accession:: YP_009482017 ↗
Protein ID:: Cytochrome_P450
Kingdom:: euk

Quality

73.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 96-138_184-294

PDB

Domain cluster: rep: Cytochrome_P450__YP_009165152__Mollivirus_sibericum_Viruses.__X__D151-341

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6n6qD00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.71	65.0	4.66e-01	100.0%	42.7%
3rfyA02	1.20.120.290	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle	0.62	34.0	3.95e-01	72.1%	73.8%
2uuiA00	1.20.120.550	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain	0.53	33.0	3.36e-01	81.8%	60.6%
3op0A01	1.20.930.20	Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain	0.51	36.0	3.79e-01	80.5%	82.4%
2z1qB04	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.50	34.0	3.63e-01	95.5%	77.9%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3697880	149.1.1.1 ↗	alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450	0.82	77.0	5.24e-01	100.0%	40.8%
4347130	149.1.1.1 ↗	alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450	0.81	76.0	5.15e-01	100.0%	40.2%
3652016	149.1.1.1 ↗	alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450	0.77	72.0	4.93e-01	100.0%	37.1%
3408733	149.1.1.1 ↗	alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450	0.75	69.0	4.80e-01	100.0%	42.6%
4020935	149.1.1.1 ↗	alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450	0.71	66.0	4.45e-01	100.0%	40.0%
3656969	5059.1.1.5 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA	0.58	44.0	3.48e-01	79.2%	79.1%
4680407	3684.1.1.0 ↗	alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like	0.57	39.0	3.81e-01	80.5%	62.3%
3467431	5069.1.1.7 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561	0.55	43.0	4.00e-01	83.1%	94.5%
3397093	632.1.1.3 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid	0.55	37.0	4.04e-01	79.9%	84.0%
3209446	632.22.1.131 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › SOG2	0.55	43.0	4.50e-01	94.2%	94.8%
3452617	5059.1.1.24 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › PUNUT	0.54	39.0	3.13e-01	76.6%	94.3%
3321745	601.1.1.105 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › RPW8	0.53	34.0	3.77e-01	87.0%	80.8%
3598975	150.1.1.0 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin	0.52	37.0	3.64e-01	95.5%	66.5%
3614754	5.1.4.301 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7	0.51	36.0	2.57e-01	95.5%	21.3%
3523903	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.51	24.0	3.28e-01	74.0%	85.0%
3398473	632.1.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain	0.51	31.0	3.54e-01	79.9%	82.7%

D2 medium residues 295-370

PDB

Domain cluster: rep: Cytochrome_P450__YP_009480832__Pandoravirus_macleodensis__2107707__D324-385

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00067.28 best	p450	54.1	1.60e-14	100.0%	15.8%