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D-lactate_dehydrogenase

Euk-Vir

Only_Syngen_Nebraska_virus_5

D-lactate_dehydrogenase__YP_009325533__Only_Syngen_Nebraska_virus_5__1917232

Identity

Accession:
YP_009325533 ↗
Protein ID:
D-lactate_dehydrogenase
Kingdom:
euk

Quality

70.1 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Chlorovirus› Only_Syngen_Nebraska_virus_5

TaxID: 1917232

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-127_332-353
PDB
Domain cluster: rep: hypothetical_protein_MIMI_gp0388__YP_003986862__Acanthamoeba_polyphaga_mimivirus__212035__D135-264
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00389.37 best 2-Hacid_dh 62.2 5.70e-17 99.2% 91.0%
CATH (95)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cujA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.92 88.0 8.42e-01 100.0% 91.7%
6abiA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.89 84.0 8.04e-01 100.0% 89.6%
1xdwA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.88 83.0 8.00e-01 100.0% 92.5%
1j4aD01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.86 81.0 7.73e-01 100.0% 91.1%
1dxyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.85 80.0 7.66e-01 100.0% 91.7%
4xkjA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 78.0 7.43e-01 100.0% 90.4%
2yq5C01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 78.0 7.50e-01 100.0% 92.5%
4g2nA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.83 78.0 7.55e-01 100.0% 93.0%
5tx7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 77.0 7.40e-01 100.0% 89.5%
3kb6A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 75.0 7.31e-01 100.0% 89.3%
2eklA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 72.0 7.21e-01 100.0% 91.7%
1hkuA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 76.0 7.35e-01 100.0% 90.2%
5l4lA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.81 75.0 5.62e-01 100.0% 64.7%
1u9jA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.80 74.0 5.74e-01 100.0% 86.5%
2gcgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.79 73.0 7.03e-01 100.0% 90.4%
1ygyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.79 73.0 6.93e-01 100.0% 86.8%
6pexA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.78 71.0 6.98e-01 100.0% 90.6%
4njmA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.78 72.0 6.85e-01 100.0% 88.3%
2w2kA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.77 72.0 6.60e-01 100.0% 87.9%
3n53A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 64.0 6.52e-01 100.0% 91.5%
3kyiB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 60.0 6.40e-01 100.0% 96.2%
3khtA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 69.0 6.68e-01 100.0% 95.5%
3eodA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 64.0 6.54e-01 100.0% 94.8%
4pg4A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.74 69.0 6.21e-01 100.0% 91.9%
3nhmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 64.0 6.58e-01 100.0% 96.5%
5x5jA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.73 65.0 6.55e-01 100.0% 95.8%
3a0uA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.73 65.0 6.63e-01 99.2% 98.3%
2hqoA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.73 64.0 6.45e-01 100.0% 95.0%
2qzjA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.73 65.0 6.51e-01 100.0% 95.0%
2jk1A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 65.0 6.21e-01 100.0% 84.1%
3clkB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 61.0 6.07e-01 100.0% 88.5%
3hebA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 66.0 6.19e-01 100.0% 95.8%
1k68A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 65.0 6.19e-01 100.0% 96.4%
2w2kA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 59.0 4.95e-01 88.2% 74.0%
2fp4A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 54.0 5.41e-01 79.8% 93.5%
2pl1A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.71 65.0 6.49e-01 100.0% 96.7%
1d5wA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.71 64.0 6.37e-01 100.0% 94.3%
4d6yA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.71 65.0 6.51e-01 100.0% 97.5%
3m6mD00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 64.0 6.48e-01 99.2% 99.2%
3e82B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 64.0 6.00e-01 100.0% 93.2%
6xehA01 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 60.0 6.23e-01 96.6% 100.0%
4isbA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.70 62.0 4.21e-01 95.0% 28.5%
2qvgA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 64.0 6.29e-01 100.0% 99.2%
1ab5A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 64.0 6.34e-01 100.0% 98.4%
3wg9A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 57.0 5.35e-01 85.7% 81.4%
6o15A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 58.0 5.86e-01 88.2% 99.2%
5x4kA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.69 62.0 5.27e-01 97.5% 64.6%
2fepA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 63.0 6.07e-01 100.0% 88.7%
3l2bA02 3.40.1390.20 Alpha Beta › 3-Layer(aba) Sandwich › Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1 › HprK N-terminal domain-like 0.69 47.0 4.78e-01 96.6% 70.7%
1iukA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 62.0 5.90e-01 96.6% 88.2%
1y81A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 59.0 6.02e-01 93.3% 98.3%
4oo3A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 51.0 4.78e-01 78.2% 93.1%
2pv7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 61.0 5.55e-01 98.3% 81.1%
7b7tA02 3.40.50.2030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 61.0 5.56e-01 100.0% 86.8%
3ff4A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 61.0 6.06e-01 98.3% 96.7%
1y0eA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 51.0 4.12e-01 80.7% 88.3%
7bexA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 60.0 5.43e-01 98.3% 99.4%
1ydwA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 58.0 5.65e-01 94.1% 98.4%
1ks9A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 58.0 5.21e-01 97.5% 92.8%
2duwA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 57.0 5.46e-01 95.0% 86.1%
2d0iA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 49.0 4.19e-01 80.7% 72.9%
4n9wA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.63 57.0 5.00e-01 100.0% 79.1%
2y1hB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.63 54.0 4.20e-01 95.0% 94.3%
5b51A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.62 52.0 5.06e-01 97.5% 82.6%
4bjhB01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.62 53.0 4.94e-01 100.0% 76.2%
1vq2A00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.62 50.0 4.41e-01 86.6% 90.2%
5gizA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.61 52.0 5.13e-01 97.5% 86.0%
5mh6A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 50.0 4.35e-01 89.1% 76.3%
3ujpA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.61 51.0 5.19e-01 99.2% 93.9%
2hvwA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.61 49.0 4.61e-01 86.6% 91.8%
1vizA00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.60 46.0 3.73e-01 85.7% 42.7%
2z6iA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 52.0 3.87e-01 96.6% 54.7%
3op2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 49.0 3.95e-01 90.8% 75.7%
3ve9A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 48.0 4.06e-01 88.2% 84.3%
5lsmG00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 51.0 3.76e-01 96.6% 62.5%
3fedA02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.59 47.0 3.84e-01 85.7% 96.4%
5w56B02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.58 48.0 4.73e-01 89.1% 99.2%
3qvqA00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.58 49.0 3.89e-01 92.4% 90.4%
4tjvA00 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.58 46.0 4.20e-01 86.6% 86.1%
4h0fA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.57 47.0 4.93e-01 96.6% 98.2%
5b1hA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 40.0 4.28e-01 73.1% 91.2%
4ntdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 47.0 4.93e-01 95.0% 96.4%
6okdA02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.57 46.0 4.14e-01 86.6% 97.6%
8acrA01 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.57 47.0 4.42e-01 99.2% 72.5%
3ktsA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 47.0 4.08e-01 90.8% 89.2%
4mwaA00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.56 49.0 3.88e-01 100.0% 95.0%
3ks6A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.55 48.0 3.83e-01 96.6% 90.0%
3lq1A02 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.55 47.0 4.22e-01 94.1% 74.0%
2f6uA00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.55 45.0 3.69e-01 89.1% 83.5%
1p5jA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 39.0 4.24e-01 73.1% 90.6%
3im9A01 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.55 47.0 3.76e-01 94.1% 95.8%
4navA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 48.0 4.17e-01 100.0% 81.2%
8a57D01 3.40.50.11060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTPase HflX, N-terminal domain 0.53 42.0 4.42e-01 94.1% 100.0%
2i71A01 3.40.50.10640 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like 0.51 45.0 3.72e-01 98.3% 82.1%
4tweA02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.51 45.0 3.69e-01 99.2% 76.8%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2873097 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.91 72.0 7.84e-01 81.5% 96.1%
3182714 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.90 87.0 8.00e-01 100.0% 90.3%
2392433 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.90 73.0 7.78e-01 89.1% 94.3%
1715872 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.89 72.0 7.52e-01 85.7% 90.0%
4225690 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.89 85.0 8.20e-01 100.0% 91.5%
1565244 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.89 84.0 8.09e-01 100.0% 89.5%
4400191 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.88 83.0 7.99e-01 100.0% 92.5%
3588083 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.88 83.0 7.90e-01 100.0% 89.6%
3839801 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.87 80.0 7.91e-01 100.0% 93.5%
4937421 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.87 80.0 7.99e-01 99.2% 95.8%
105142 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.85 70.0 7.53e-01 85.7% 99.0%
4032242 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.85 80.0 7.75e-01 100.0% 93.1%
10082 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.84 67.0 7.31e-01 89.1% 99.0%
5040668 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.83 76.0 7.29e-01 100.0% 85.9%
4947009 2003.1.11.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh_C 0.83 72.0 7.38e-01 100.0% 95.6%
3816467 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.83 73.0 6.81e-01 100.0% 77.2%
2663276 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.83 67.0 7.20e-01 85.7% 99.0%
4972506 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.82 71.0 7.28e-01 100.0% 94.8%
4977618 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.82 71.0 6.85e-01 98.3% 83.8%
4967280 2003.1.11.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like 0.82 74.0 6.77e-01 100.0% 76.7%
3403704 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.81 75.0 7.12e-01 100.0% 85.7%
1297334 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.81 65.0 7.02e-01 89.1% 99.0%
5037072 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.81 74.0 7.47e-01 99.2% 99.2%
160078 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.80 63.0 6.75e-01 85.7% 93.3%
377050 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.80 62.0 6.80e-01 85.7% 99.0%
4489586 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.80 74.0 7.41e-01 99.2% 98.3%
3667896 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.80 74.0 6.26e-01 100.0% 74.7%
4999266 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.79 72.0 7.06e-01 99.2% 92.0%
167407 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.78 60.0 6.47e-01 81.5% 94.9%
3386668 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.78 72.0 7.05e-01 100.0% 93.1%
3284947 2003.1.1.67 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 0.78 72.0 5.34e-01 100.0% 59.2%
4419523 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.77 71.0 6.85e-01 100.0% 88.1%
3961294 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.77 59.0 6.55e-01 84.0% 100.0%
3949282 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.76 68.0 6.43e-01 96.6% 100.0%
3838023 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.76 65.0 6.44e-01 100.0% 87.2%
5035585 2003.1.1.22 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.75 69.0 5.85e-01 100.0% 89.5%
150389 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.75 60.0 6.34e-01 85.7% 95.2%
4945241 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.74 65.0 6.43e-01 100.0% 89.6%
3986135 2007.1.3.43 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF30453 0.74 62.0 6.29e-01 98.3% 91.3%
3276403 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.73 67.0 5.16e-01 100.0% 45.9%
4944058 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.73 65.0 6.65e-01 100.0% 98.3%
4410907 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.73 67.0 6.22e-01 100.0% 80.0%
319516 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.73 64.0 6.45e-01 100.0% 95.0%
4466585 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.72 67.0 6.23e-01 100.0% 81.4%
4956711 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.72 53.0 5.21e-01 100.0% 70.8%
3385576 2003.1.1.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 0.71 65.0 6.24e-01 97.5% 88.1%
2527139 2003.1.11.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh 0.71 56.0 5.81e-01 85.7% 89.2%
4964951 2007.15.1.18 ↗ a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › DUF7509 0.71 65.0 5.74e-01 100.0% 84.1%
4947885 2003.1.1.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 0.71 64.0 6.22e-01 96.6% 91.5%
4150035 7512.1.1.14 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_N 0.71 64.0 4.99e-01 100.0% 76.1%
2643834 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.70 62.0 6.15e-01 100.0% 92.0%
4933297 2003.1.1.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 0.70 63.0 5.92e-01 96.6% 84.7%
143014 2003.1.1.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 0.70 63.0 5.93e-01 96.6% 83.1%
3970732 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.70 64.0 6.28e-01 100.0% 91.5%
3977589 2003.1.1.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 0.69 63.0 6.10e-01 96.6% 91.5%
3820426 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.69 61.0 5.48e-01 100.0% 69.1%
3970353 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.69 62.0 6.14e-01 100.0% 92.8%
3704367 2003.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Gp_dh_N 0.69 64.0 5.51e-01 100.0% 92.8%
5017621 2003.1.1.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 0.69 62.0 5.96e-01 96.6% 88.8%
9210 2003.1.1.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 0.69 62.0 5.90e-01 96.6% 88.2%
5070020 2003.1.1.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 0.69 62.0 5.84e-01 96.6% 84.3%
169778 2003.1.1.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 0.67 61.0 6.06e-01 98.3% 96.7%
5028271 2003.1.1.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_binding_2 0.66 58.0 5.81e-01 94.1% 95.0%
5053327 2007.3.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.66 61.0 5.53e-01 100.0% 76.8%
4153559 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.65 58.0 5.82e-01 100.0% 97.5%
4929934 2492.1.1.1 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.65 53.0 4.93e-01 86.6% 94.0%
4943194 2492.1.1.1 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.65 53.0 4.75e-01 85.7% 93.8%
5030300 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.65 58.0 5.46e-01 99.2% 90.3%
None — 0.65 57.0 4.34e-01 95.0% 47.8%
3789031 7573.1.1.3 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyl_synth 0.65 53.0 4.31e-01 89.1% 91.7%
5023877 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.65 52.0 5.18e-01 85.7% 83.2%
1412120 2492.1.1.1 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.65 49.0 4.65e-01 78.2% 93.4%
3383444 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 56.0 5.16e-01 100.0% 73.5%
5018122 2492.1.1.1 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.64 50.0 4.55e-01 81.5% 76.8%
4016190 129.1.1.0 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.64 55.0 4.83e-01 93.3% 83.4%
4953428 2003.1.1.31 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CbiJ 0.63 58.0 5.65e-01 99.2% 96.9%
4541215 2007.1.14.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 0.63 52.0 5.25e-01 97.5% 89.2%
3386764 2007.1.14.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › ZnuA 0.63 48.0 4.91e-01 98.3% 84.3%
181095 2002.1.1.97 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI 0.63 47.0 3.98e-01 78.2% 84.5%
4969563 2007.1.14.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › ZnuA 0.63 49.0 4.83e-01 100.0% 77.5%
1839947 2003.1.1.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Oxidoreduct_C 0.62 53.0 4.91e-01 91.6% 93.4%
5080232 2492.1.1.1 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.62 50.0 4.40e-01 86.6% 94.3%
2084873 2007.1.14.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 0.61 52.0 5.20e-01 97.5% 89.5%
4993768 7597.1.1.0 ↗ a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.61 46.0 4.95e-01 94.1% 98.9%
4968622 2492.1.1.1 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.60 50.0 4.43e-01 88.2% 97.6%
3421509 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.59 49.0 4.69e-01 100.0% 76.4%
3647077 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.59 47.0 3.80e-01 85.7% 96.5%
4649312 2007.1.14.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › ZnuA 0.58 45.0 4.57e-01 97.5% 84.3%
1423665 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.58 46.0 4.20e-01 86.6% 86.1%
3897405 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.58 46.0 4.27e-01 85.7% 90.3%
4947395 2007.1.14.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like 0.58 47.0 4.87e-01 89.1% 100.0%
3630432 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.56 45.0 4.13e-01 86.6% 83.1%
4074516 2003.1.4.10 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2 0.56 48.0 4.23e-01 94.1% 71.4%
3413520 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.55 44.0 4.06e-01 88.2% 85.6%
5016441 2007.1.14.7 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D 0.55 49.0 4.39e-01 100.0% 70.6%
3488039 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.55 44.0 4.26e-01 89.1% 94.3%
4018179 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.52 46.0 4.19e-01 99.2% 72.8%
4348363 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.51 44.0 3.22e-01 100.0% 63.2%
D2 high residues 129-150_162-327
PDB
Domain cluster: rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00177__D3-170_207-231
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02826.26 best 2-Hacid_dh_C 161.0 2.80e-47 96.8% 83.7%