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D5_family_helicase

Euk-Vir

Phaeocystis_globosa_virus

D5_family_helicase__YP_008052518__Phaeocystis_globosa_virus__251749

Identity

Accession:
YP_008052518 ↗
Protein ID:
D5_family_helicase
Kingdom:
euk

Quality

71.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 81-276
PDB
D3 medium residues 307-415
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08707.17 best PriCT_2 40.6 3.80e-10 73.4% 80.5%
D4 medium residues 416-563
PDB
D5 medium residues 612-664_812-865
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qgpB00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.54 34.0 3.49e-01 84.1% 63.6%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 30.0 3.55e-01 70.1% 80.8%
3hl1A02 6.10.140.1530 Special › Helix non-globular › Helix Hairpins › 0.51 30.0 3.76e-01 72.9% 96.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1300229 159.1.1.2 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG-like 0.55 35.0 3.60e-01 83.2% 68.0%
3889291 5050.1.1.6 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP 0.52 42.0 3.26e-01 87.9% 90.6%
D6 medium residues 665-795
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19263.6 best DUF5906 33.2 1.00e-07 90.1% 99.1%