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D5_family_helicase
Euk-VirPhaeocystis_globosa_virus
D5_family_helicase__YP_008052518__Phaeocystis_globosa_virus__251749
Identity
- Accession:
- YP_008052518 ↗
- Protein ID:
- D5_family_helicase
- Kingdom:
- euk
Quality
71.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prymnesiovirus›
Phaeocystis_globosa_virus
TaxID: 251749
Cluster
View cluster (27 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 81-276
D2
high
residues 866-933
D3
medium
residues 307-415
Domain cluster:
rep: pC962R_1__YP_009703320__African_swine_fever_virus__10497__D1-93
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08707.17 best | PriCT_2 | 40.6 | 3.80e-10 | 73.4% | 80.5% |
D4
medium
residues 416-563
Domain cluster:
rep: D5_family_helicase__YP_009173524__Chrysochromulina_ericina_virus__455364__D416-543
D5
medium
residues 612-664_812-865
Domain cluster:
rep: putative_D5-ATPase-helicase__YP_009052397__Aureococcus_anophagefferens_virus__1474867__D587-621_752-814
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.54 | 34.0 | 3.49e-01 | 84.1% | 63.6% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 30.0 | 3.55e-01 | 70.1% | 80.8% |
| 3hl1A02 | 6.10.140.1530 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 30.0 | 3.76e-01 | 72.9% | 96.9% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1300229 | 159.1.1.2 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG-like | 0.55 | 35.0 | 3.60e-01 | 83.2% | 68.0% |
| 3889291 | 5050.1.1.6 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP | 0.52 | 42.0 | 3.26e-01 | 87.9% | 90.6% |
D6
medium
residues 665-795
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19263.6 best | DUF5906 | 33.2 | 1.00e-07 | 90.1% | 99.1% |