DBP-1

Euk-Vir

Euproctis_pseudoconspersa_nucleopolyhedrovirus

DBP-1__YP_002854654__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467

Identity

78.2 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Euproctis_pseudoconspersa_nucleopolyhedrovirus

TaxID: 307467

View cluster (24 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 91-317

PDB

Domain cluster: rep: ssDNA_binding_protein__YP_009118586__Condylorrhiza_vestigialis_MNPV__1592576__D101-219_236-303

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04786.19 best	Baculo_DNA_bind	248.7	8.40e-74	100.0%	89.9%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4pofA02	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.58	29.0	4.03e-01	93.4%	99.0%
2vqpA01	2.70.20.30	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › HRSV-S2 matrix protein, N-terminal domain	0.53	29.0	3.85e-01	82.4%	97.5%
5tdeA01	3.30.470.20	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain	0.50	22.0	2.70e-01	74.4%	59.1%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3380367	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.65	53.0	5.69e-01	96.5%	99.0%
3604594	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.61	30.0	4.28e-01	96.9%	100.0%
5012513	2.1.1.15 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon	0.60	32.0	3.99e-01	94.7%	83.7%
5014684	3115.1.1.0 ↗	a+b two layers › GP2-like › RplX-like › RplX-like	0.50	14.0	2.99e-01	93.8%	100.0%