DBP2

Euk-Vir

Euproctis_pseudoconspersa_nucleopolyhedrovirus

DBP2__YP_002854664__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467

Identity

81.1 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Euproctis_pseudoconspersa_nucleopolyhedrovirus

TaxID: 307467

View cluster (35 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 50-76_104-228_258-269

PDB

Domain cluster: rep: ssDNA_binding_protein__YP_009118586__Condylorrhiza_vestigialis_MNPV__1592576__D101-219_236-303

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04786.19 best	Baculo_DNA_bind	102.3	4.20e-29	78.7%	51.8%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1uebA02	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.73	31.0	4.75e-01	90.2%	100.0%
2qcpX01	2.40.50.320	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF	0.62	30.0	4.30e-01	90.9%	100.0%
3amuA02	2.40.50.1010	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.59	35.0	3.79e-01	93.3%	68.4%
6nrzA01	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.56	34.0	3.57e-01	96.3%	63.2%
4gs3A00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.53	30.0	3.91e-01	91.5%	100.0%
6k2lA01	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.51	34.0	4.03e-01	82.9%	99.1%
3aqoA02	3.30.1360.200	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 ›	0.51	33.0	3.57e-01	97.6%	76.6%
3u4zA00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.51	30.0	3.57e-01	89.6%	87.2%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5032433	7014.1.1.2 ↗	alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE	0.58	26.0	2.70e-01	92.7%	43.3%
1102425	2.1.1.22 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN	0.56	28.0	3.64e-01	89.0%	84.6%
4486408	2.1.1.326 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF5482	0.52	43.0	4.54e-01	92.7%	97.9%
3908392	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.51	30.0	3.52e-01	92.7%	82.6%
3479101	241.6.1.0 ↗	a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits	0.50	27.0	3.10e-01	74.4%	69.2%

D2 medium residues 77-103_229-257

PDB

Domain cluster: representative

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3628577	304.112.1.0 ↗	a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain	0.58	48.0	3.44e-01	98.2%	30.6%
4260807	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.57	40.0	3.77e-01	100.0%	60.0%
3342267	9.1.1.0 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins	0.55	44.0	3.13e-01	100.0%	27.8%
3645656	243.3.1.19 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615	0.55	48.0	4.34e-01	100.0%	80.0%
4135453	9.13.1.0 ↗	beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like	0.55	35.0	2.99e-01	100.0%	36.0%
4026160	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.53	35.0	2.04e-01	92.9%	5.8%