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DBP
Euk-VirArtogeia_rapae_granulovirus
DBP__YP_003429390__Artogeia_rapae_granulovirus__362830
Identity
- Accession:
- YP_003429390 ↗
- Protein ID:
- DBP
- Kingdom:
- euk
Quality
87.5
mean pLDDT
Taxonomy
TaxID: 362830
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-65_101-138_171-248_269-281
Domain cluster:
rep: DNA_binding_protein__YP_006908583__Epinotia_aporema_granulovirus__166056__D16-56_115-135_172-249_269-279
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04786.19 best | Baculo_DNA_bind | 79.4 | 4.00e-22 | 48.3% | 33.6% |
| PF04786.19 | Baculo_DNA_bind | 43.3 | 4.20e-11 | 28.5% | 17.0% |
D2
medium
residues 66-100_139-170_249-268
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kvpA00 | 6.20.140.10 | Special › Other non-globular › Immunoglobulin-like › | 0.56 | 25.0 | 3.38e-01 | 74.7% | 83.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3483369 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.54 | 46.0 | 3.22e-01 | 95.4% | 78.1% |
| 3998976 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.53 | 24.0 | 3.18e-01 | 72.4% | 80.0% |