Back to structures

DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00062

Bact-Vir

DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00062

Identity

Kingdom:
phage

Quality

75.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-74
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fd4A00 3.30.40.110 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain 0.54 37.0 3.22e-01 70.0% 85.7%
3nzbX00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.54 45.0 3.34e-01 98.6% 57.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4666011 4263.2.1.0 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.56 41.0 3.93e-01 77.1% 67.5%
3594647 2484.3.1.0 mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain 0.55 43.0 3.15e-01 90.0% 75.7%
3711630 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 38.0 3.11e-01 75.7% 36.6%
4508415 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.54 46.0 3.25e-01 100.0% 32.2%
3635316 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 39.0 3.90e-01 82.9% 77.3%
3369280 2484.1.1.153 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.50 42.0 2.69e-01 100.0% 60.0%