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DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00133

Bact-Vir

DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00133

Identity

Kingdom:
phage

Quality

72.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-118
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qzuA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 33.0 3.61e-01 76.9% 64.7%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.59 33.0 3.87e-01 82.7% 78.9%
3t4nA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.59 32.0 3.30e-01 76.0% 55.2%
3ke6B01 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.59 51.0 4.06e-01 99.0% 99.1%
3zt9A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.57 49.0 4.09e-01 97.1% 97.9%
2rqxA00 2.40.50.650 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 41.0 4.54e-01 93.3% 96.3%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 44.0 4.28e-01 100.0% 75.4%
3w42A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.54 46.0 3.82e-01 97.1% 97.5%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 50.0 4.75e-01 100.0% 99.2%
4kp4A02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 36.0 3.24e-01 71.2% 93.2%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 47.0 3.63e-01 100.0% 54.1%
6fmeA03 2.20.220.10 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › alpha-Amylases 0.51 28.0 3.51e-01 74.0% 91.9%
5w0kA01 3.90.380.20 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II 0.50 43.0 3.16e-01 100.0% 64.0%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3519601 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.66 38.0 3.69e-01 76.9% 49.2%
5062732 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.65 35.0 3.81e-01 99.0% 63.5%
4961327 3264.1.1.0 ↗ 0.62 33.0 2.88e-01 75.0% 33.1%
3171956 9.1.1.45 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › FBO_C 0.57 50.0 4.48e-01 98.1% 93.3%
4945471 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 34.0 3.99e-01 94.2% 93.8%
3957060 325.1.6.2 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.55 39.0 3.52e-01 76.0% 52.4%
1140542 210.2.1.2 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.54 46.0 3.82e-01 97.1% 97.5%
3484575 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.53 39.0 3.75e-01 88.5% 66.7%
2095478 3146.1.1.1 ↗ a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H 0.51 44.0 2.90e-01 100.0% 40.9%
4127988 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.50 39.0 3.61e-01 90.4% 62.9%
3476559 5.1.13.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain of DCAF15 › DCAF15_WD40 0.50 45.0 3.16e-01 100.0% 82.9%