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DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00239
Bact-VirDGJ7_scaffold_2_2069_prodigal-single.1__X__X__00239
Identity
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 47-122
Domain cluster:
rep: term2_saliva_scaffold_1_prodigal-single.1__X__X__00126__D50-128
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.81 | 49.0 | 6.04e-01 | 81.6% | 100.0% |
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.80 | 56.0 | 5.59e-01 | 93.4% | 71.4% |
| 4b8vA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.77 | 54.0 | 5.76e-01 | 97.4% | 83.6% |
| 2mtzA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.77 | 49.0 | 5.71e-01 | 89.5% | 98.0% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.76 | 48.0 | 5.69e-01 | 86.8% | 100.0% |
| 2cpjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 39.0 | 3.63e-01 | 93.4% | 49.5% |
| 2dhaA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 42.0 | 3.60e-01 | 90.8% | 45.5% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 39.0 | 3.94e-01 | 93.4% | 66.7% |
| 2mzjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 38.0 | 3.72e-01 | 97.4% | 59.8% |
| 4bopB00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.59 | 41.0 | 3.24e-01 | 72.4% | 46.7% |
| 7csxA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 39.0 | 4.05e-01 | 93.4% | 75.0% |
| 4bouA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.58 | 40.0 | 3.26e-01 | 72.4% | 50.4% |
| 1whwA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 39.0 | 3.69e-01 | 94.7% | 59.6% |
| 4iiwA01 | 3.30.1490.480 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Endolytic murein transglycosylase | 0.55 | 39.0 | 3.99e-01 | 100.0% | 77.6% |
| 6dx5A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 40.0 | 3.06e-01 | 77.6% | 66.3% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3413357 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 57.0 | 5.95e-01 | 89.5% | 74.3% |
| 3413453 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 55.0 | 6.60e-01 | 86.8% | 100.0% |
| 3903953 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 55.0 | 6.57e-01 | 90.8% | 100.0% |
| 3925474 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 54.0 | 6.54e-01 | 86.8% | 100.0% |
| 3331840 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 59.0 | 6.81e-01 | 96.1% | 100.0% |
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 59.0 | 6.80e-01 | 93.4% | 100.0% |
| 3955076 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 49.0 | 6.15e-01 | 76.3% | 100.0% |
| 3517460 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 55.0 | 6.39e-01 | 89.5% | 94.5% |
| 3846469 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 56.0 | 5.29e-01 | 90.8% | 58.9% |
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.83 | 67.0 | 7.01e-01 | 100.0% | 92.9% |
| 3250125 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 58.0 | 6.21e-01 | 90.8% | 84.6% |
| 3349612 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.82 | 52.0 | 6.27e-01 | 89.5% | 98.0% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 57.0 | 6.58e-01 | 92.1% | 100.0% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 57.0 | 6.61e-01 | 93.4% | 100.0% |
| 3452845 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 52.0 | 6.01e-01 | 88.2% | 90.9% |
| 2047861 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 53.0 | 6.02e-01 | 89.5% | 89.7% |
| 4249176 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 53.0 | 5.94e-01 | 90.8% | 86.7% |
| 3979943 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.80 | 52.0 | 6.24e-01 | 81.6% | 100.0% |
| 162111 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 56.0 | 5.59e-01 | 93.4% | 71.4% |
| 3974521 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 56.0 | 6.23e-01 | 94.7% | 93.3% |
| 1758716 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 52.0 | 6.11e-01 | 89.5% | 100.0% |
| 3898121 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 53.0 | 6.12e-01 | 92.1% | 98.2% |
| 4492966 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 51.0 | 5.90e-01 | 89.5% | 94.5% |
| 3969916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 56.0 | 5.87e-01 | 98.7% | 84.3% |
| 3691772 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.76 | 52.0 | 5.92e-01 | 93.4% | 96.4% |
| 2809236 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 56.0 | 6.13e-01 | 90.8% | 96.8% |
| 4128043 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 44.0 | 5.40e-01 | 80.3% | 100.0% |
| 2895417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.74 | 54.0 | 5.41e-01 | 93.4% | 75.3% |
| 3966498 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.73 | 52.0 | 5.60e-01 | 92.1% | 87.7% |
| 3810505 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.73 | 56.0 | 4.24e-01 | 93.4% | 37.0% |
| 3426433 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.73 | 55.0 | 6.08e-01 | 92.1% | 100.0% |
| 3166029 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.73 | 49.0 | 5.51e-01 | 86.8% | 96.4% |
| 4022922 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 49.0 | 5.60e-01 | 93.4% | 96.4% |
| 2124917 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 54.0 | 4.13e-01 | 93.4% | 37.3% |
| 4176074 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.71 | 52.0 | 5.68e-01 | 88.2% | 96.7% |
| 3303205 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.68 | 51.0 | 5.59e-01 | 90.8% | 100.0% |
| 3641672 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.68 | 53.0 | 5.37e-01 | 93.4% | 84.0% |
| 3320955 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.67 | 54.0 | 5.78e-01 | 93.4% | 100.0% |
| 3367888 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.65 | 55.0 | 5.69e-01 | 93.4% | 97.1% |
| 3365578 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.64 | 53.0 | 5.28e-01 | 93.4% | 86.3% |
| 3381619 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.63 | 55.0 | 3.66e-01 | 96.1% | 60.8% |
| 3417561 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.63 | 56.0 | 3.69e-01 | 97.4% | 60.7% |
| 3670445 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.62 | 55.0 | 3.62e-01 | 97.4% | 58.7% |
| 3337328 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.62 | 55.0 | 3.66e-01 | 96.1% | 63.0% |
| 4069716 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.61 | 53.0 | 4.50e-01 | 93.4% | 99.2% |
| 3305689 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.59 | 51.0 | 4.12e-01 | 93.4% | 85.7% |
| 3715701 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.59 | 43.0 | 3.29e-01 | 76.3% | 61.8% |
| 3756183 | 304.9.1.77 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 | 0.59 | 40.0 | 2.89e-01 | 93.4% | 23.5% |
| 5023734 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 47.0 | 3.37e-01 | 98.7% | 71.8% |
| 3990074 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.53 | 45.0 | 4.11e-01 | 98.7% | 79.0% |