←Back to structures
DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00243
Bact-VirDGJ7_scaffold_2_2069_prodigal-single.1__X__X__00243
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-40_66-204
Domain cluster:
rep: IMGVR_UViG_3300028797_000097-3300028797-Ga0265301_10000033132__D7-193
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23849.3 best | Phage_TTP_2 | 37.5 | 3.60e-09 | 97.5% | 81.9% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.79 | 60.0 | 6.12e-01 | 100.0% | 80.1% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.79 | 63.0 | 6.27e-01 | 100.0% | 80.9% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.75 | 60.0 | 6.06e-01 | 100.0% | 82.5% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.74 | 59.0 | 6.14e-01 | 100.0% | 88.6% |
| 4feuF01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.71 | 31.0 | 4.39e-01 | 96.2% | 87.7% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 28.0 | 3.73e-01 | 83.0% | 79.5% |
| 5lhrA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 38.0 | 4.30e-01 | 100.0% | 87.2% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 18.0 | 2.78e-01 | 98.1% | 65.5% |
| 2aiqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 32.0 | 3.62e-01 | 100.0% | 74.3% |
| 6mv4H02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 33.0 | 3.84e-01 | 100.0% | 84.3% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.53 | 36.0 | 4.08e-01 | 99.4% | 92.4% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 28.0 | 3.34e-01 | 85.5% | 75.0% |
| 5xyiU00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.51 | 28.0 | 3.38e-01 | 84.9% | 83.5% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.51 | 29.0 | 3.50e-01 | 85.5% | 85.3% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.50 | 39.0 | 4.20e-01 | 98.7% | 96.3% |
| 1f0xA01 | 3.30.70.610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › D-lactate dehydrogenase, cap domain, subdomain 1 | 0.50 | 25.0 | 3.09e-01 | 92.5% | 75.0% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003885 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.87 | 69.0 | 7.26e-01 | 100.0% | 89.0% |
| 2101663 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.86 | 74.0 | 7.39e-01 | 99.4% | 87.7% |
| 3581358 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.85 | 72.0 | 7.29e-01 | 100.0% | 89.0% |
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.85 | 61.0 | 5.01e-01 | 100.0% | 43.3% |
| 4995820 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.85 | 67.0 | 7.37e-01 | 100.0% | 98.5% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.85 | 69.0 | 7.20e-01 | 100.0% | 90.6% |
| 2471641 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.84 | 66.0 | 6.82e-01 | 100.0% | 85.9% |
| 4995819 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.84 | 74.0 | 7.62e-01 | 100.0% | 97.3% |
| 2832217 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.84 | 66.0 | 7.04e-01 | 100.0% | 91.5% |
| 3058416 | 1.1.5.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD | 0.84 | 59.0 | 6.52e-01 | 100.0% | 89.0% |
| 4140243 | 1.1.5.82 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 | 0.81 | 54.0 | 6.27e-01 | 100.0% | 92.2% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.81 | 61.0 | 6.55e-01 | 100.0% | 88.6% |
| 3096576 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.80 | 66.0 | 6.67e-01 | 100.0% | 86.2% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 60.0 | 6.74e-01 | 100.0% | 100.0% |
| 136185 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.79 | 63.0 | 6.27e-01 | 100.0% | 80.9% |
| 2832216 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.78 | 66.0 | 6.79e-01 | 100.0% | 92.2% |
| 4929752 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.78 | 61.0 | 6.19e-01 | 100.0% | 82.6% |
| 3976188 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.77 | 60.0 | 5.97e-01 | 100.0% | 77.6% |
| 1563850 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.75 | 60.0 | 6.05e-01 | 100.0% | 82.5% |
| 4988100 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 54.0 | 6.05e-01 | 100.0% | 98.4% |
| 4009489 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.73 | 59.0 | 6.02e-01 | 100.0% | 85.8% |
| 3980535 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.71 | 53.0 | 5.72e-01 | 97.5% | 91.1% |
| 2097771 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.70 | 63.0 | 6.14e-01 | 100.0% | 87.6% |
| 5004308 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 59.0 | 6.01e-01 | 100.0% | 91.6% |
| 3590380 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 60.0 | 5.74e-01 | 100.0% | 83.3% |
| 3964955 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 61.0 | 6.14e-01 | 100.0% | 97.5% |
| 3943681 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.64 | 56.0 | 5.76e-01 | 98.7% | 97.3% |
| 4050380 | 1.1.7.95 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 | 0.64 | 35.0 | 4.38e-01 | 86.8% | 88.4% |
| 3580020 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 55.0 | 5.14e-01 | 99.4% | 82.6% |
| 4027705 | 1.1.7.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Aquarius_N_2nd | 0.53 | 41.0 | 4.35e-01 | 100.0% | 89.7% |
| 4493293 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 33.0 | 3.88e-01 | 100.0% | 91.8% |
| 4575287 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 33.0 | 3.80e-01 | 100.0% | 88.5% |
| 4072538 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.52 | 28.0 | 3.18e-01 | 91.8% | 66.7% |
| 4220790 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.50 | 32.0 | 3.72e-01 | 100.0% | 89.6% |
| 4057045 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.50 | 32.0 | 3.63e-01 | 100.0% | 87.0% |