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DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00252
Bact-VirDGJ7_scaffold_2_2069_prodigal-single.1__X__X__00252
Identity
- Kingdom:
- phage
Quality
64.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-173
D2
high
residues 222-316
Domain cluster:
rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 68.0 | 7.08e-01 | 100.0% | 96.6% |
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 70.0 | 7.17e-01 | 100.0% | 100.0% |
| 1qexA02 | 2.60.120.640 | Mainly Beta › Sandwich › Jelly Rolls › gp9 | 0.77 | 71.0 | 6.92e-01 | 100.0% | 95.1% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 69.0 | 6.99e-01 | 97.9% | 98.9% |
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 69.0 | 6.55e-01 | 100.0% | 88.1% |
| 1id2A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.62 | 42.0 | 4.07e-01 | 76.8% | 62.3% |
| 6hbeA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.59 | 48.0 | 4.33e-01 | 89.5% | 82.7% |
| 8db3B02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 41.0 | 3.19e-01 | 72.6% | 53.4% |
| 1dabA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.55 | 50.0 | 3.10e-01 | 100.0% | 18.9% |
| 5fc9A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.55 | 41.0 | 4.19e-01 | 92.6% | 78.9% |
| 3dtnA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 40.0 | 3.28e-01 | 80.0% | 75.9% |
| 4u1qA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 44.0 | 3.58e-01 | 90.5% | 81.8% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 40.0 | 3.97e-01 | 82.1% | 86.4% |
| 5j83B01 | 3.50.30.80 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › IlvD/EDD C-terminal domain-like | 0.50 | 39.0 | 3.34e-01 | 86.3% | 81.9% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2581338 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.77 | 70.0 | 7.05e-01 | 100.0% | 96.9% |
| 184462 | 520.1.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › T4_gp9_10 | 0.77 | 71.0 | 5.79e-01 | 100.0% | 58.3% |
| 2581337 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.77 | 69.0 | 6.96e-01 | 97.9% | 97.8% |
| 2581339 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.77 | 68.0 | 6.92e-01 | 100.0% | 96.8% |
| 4561709 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.75 | 66.0 | 6.77e-01 | 97.9% | 98.9% |
| 185692 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.74 | 69.0 | 6.55e-01 | 100.0% | 88.1% |
| 5028349 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.65 | 46.0 | 4.29e-01 | 74.7% | 75.8% |
| 5053974 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.63 | 45.0 | 4.25e-01 | 75.8% | 75.8% |
| 4947514 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 42.0 | 3.14e-01 | 74.7% | 57.7% |
| 4947063 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.59 | 32.0 | 4.10e-01 | 87.4% | 100.0% |
| 5032279 | 325.1.8.6 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N_2 | 0.58 | 32.0 | 3.98e-01 | 88.4% | 100.0% |
| 5030451 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.57 | 41.0 | 4.03e-01 | 75.8% | 93.3% |
| 5055709 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.57 | 40.0 | 3.12e-01 | 74.7% | 54.7% |
| 3519196 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 46.0 | 4.44e-01 | 92.6% | 80.0% |
| 4403517 | 325.1.8.6 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N_2 | 0.54 | 31.0 | 3.83e-01 | 87.4% | 96.4% |
| 3405845 | 328.6.1.2 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC | 0.54 | 43.0 | 3.21e-01 | 89.5% | 49.1% |
| 3507757 | 11.1.1.385 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASH | 0.53 | 39.0 | 3.62e-01 | 92.6% | 59.2% |
| 2775473 | 12.6.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_95_C | 0.53 | 43.0 | 4.51e-01 | 94.7% | 100.0% |
| 4245981 | 7575.1.1.4 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 | 0.52 | 43.0 | 2.87e-01 | 94.7% | 90.5% |
| 3393640 | 11.1.1.385 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASH | 0.52 | 40.0 | 3.75e-01 | 85.3% | 96.7% |
| 4994819 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.51 | 42.0 | 3.20e-01 | 94.7% | 53.0% |
| 4880875 | 7575.1.1.4 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 | 0.51 | 40.0 | 3.19e-01 | 87.4% | 40.3% |
| 5056293 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.50 | 37.0 | 2.86e-01 | 78.9% | 50.7% |
| 3479207 | 328.6.1.2 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC | 0.50 | 40.0 | 2.93e-01 | 88.4% | 52.7% |