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DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00327
Bact-VirDGJ7_scaffold_2_2069_prodigal-single.1__X__X__00327
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 28-42_57-74_156-227
Domain cluster:
representative
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kzxA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.84 | 75.0 | 6.73e-01 | 94.3% | 97.8% |
| 4eekA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.82 | 73.0 | 6.21e-01 | 95.2% | 97.5% |
| 2x4dA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.80 | 70.0 | 6.00e-01 | 94.3% | 93.2% |
| 4bndA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.79 | 70.0 | 6.10e-01 | 95.2% | 96.8% |
| 3ed5A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.79 | 71.0 | 6.25e-01 | 96.2% | 98.0% |
| 3mmzC00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.78 | 70.0 | 6.02e-01 | 97.1% | 93.2% |
| 3slrA02 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.78 | 68.0 | 5.88e-01 | 94.3% | 95.6% |
| 2gfhA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.77 | 69.0 | 5.87e-01 | 94.3% | 89.4% |
| 2pkeA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.77 | 67.0 | 5.86e-01 | 93.3% | 85.7% |
| 2pr7A00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.77 | 69.0 | 6.28e-01 | 97.1% | 98.5% |
| 1wviA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.76 | 66.0 | 5.89e-01 | 93.3% | 98.6% |
| 3qnmA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.76 | 66.0 | 5.95e-01 | 93.3% | 97.9% |
| 2hx1A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.73 | 67.0 | 5.74e-01 | 98.1% | 91.4% |
| 3s28A03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.67 | 57.0 | 4.11e-01 | 94.3% | 85.5% |
| 4n40A01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.66 | 49.0 | 5.09e-01 | 93.3% | 83.0% |
| 2n3zA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 53.0 | 5.49e-01 | 100.0% | 94.9% |
| 2qjoA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.63 | 50.0 | 4.02e-01 | 82.9% | 66.3% |
| 3bedA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.62 | 53.0 | 4.97e-01 | 94.3% | 79.2% |
| 3gedA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 54.0 | 4.12e-01 | 99.0% | 91.3% |
| 4dz4A00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.60 | 51.0 | 3.65e-01 | 93.3% | 84.0% |
| 3na6A00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.59 | 52.0 | 3.72e-01 | 99.0% | 59.1% |
| 2vg0A00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.59 | 49.0 | 3.90e-01 | 93.3% | 96.5% |
| 3d8uB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 49.0 | 4.75e-01 | 94.3% | 95.8% |
| 7e76B01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 50.0 | 4.19e-01 | 98.1% | 74.9% |
| 4xltA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 49.0 | 4.61e-01 | 94.3% | 95.3% |
| 1f75A00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.57 | 48.0 | 3.86e-01 | 93.3% | 95.4% |
| 4wxmB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 49.0 | 4.59e-01 | 94.3% | 89.1% |
| 4dqlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.57 | 43.0 | 3.77e-01 | 80.0% | 93.2% |
| 6acsA00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.57 | 48.0 | 3.80e-01 | 93.3% | 90.2% |
| 4dvjA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 46.0 | 4.16e-01 | 87.6% | 82.2% |
| 2w2kA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 48.0 | 4.36e-01 | 95.2% | 88.6% |
| 5dclA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 49.0 | 4.73e-01 | 94.3% | 95.7% |
| 4eukA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 48.0 | 4.45e-01 | 94.3% | 95.6% |
| 1b0zA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.56 | 47.0 | 4.03e-01 | 97.1% | 80.4% |
| 1j0aA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 37.0 | 3.77e-01 | 94.3% | 69.2% |
| 5djsA02 | 3.40.50.11380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 48.0 | 4.06e-01 | 100.0% | 79.8% |
| 1zzgA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.55 | 46.0 | 4.01e-01 | 95.2% | 81.1% |
| 5ggiB01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 48.0 | 3.76e-01 | 99.0% | 70.9% |
| 3qyfA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.54 | 48.0 | 4.10e-01 | 97.1% | 78.8% |
| 1sc6A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 46.0 | 4.27e-01 | 94.3% | 91.0% |
| 1q45A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 46.0 | 3.24e-01 | 97.1% | 67.9% |
| 1dcfA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 44.0 | 4.13e-01 | 92.4% | 88.7% |
| 3lteD00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 45.0 | 4.36e-01 | 94.3% | 89.4% |
| 4uwmA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.53 | 40.0 | 2.86e-01 | 81.0% | 95.3% |
| 3vbcA00 | 3.40.50.11530 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 45.0 | 4.16e-01 | 94.3% | 91.9% |
| 3wi7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 43.0 | 3.25e-01 | 91.4% | 87.6% |
| 4cqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 46.0 | 3.38e-01 | 97.1% | 72.8% |
| 4myrC00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 44.0 | 4.22e-01 | 94.3% | 97.6% |
| 1p91B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 38.0 | 2.88e-01 | 98.1% | 31.0% |
| 3evtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 44.0 | 4.22e-01 | 94.3% | 91.7% |
| 5cheA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 39.0 | 3.46e-01 | 97.1% | 55.9% |
| 2yx6D01 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.51 | 42.0 | 4.29e-01 | 91.4% | 100.0% |
| 2p35A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 40.0 | 3.37e-01 | 98.1% | 50.6% |
| 1o13A00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.50 | 41.0 | 4.18e-01 | 91.4% | 100.0% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3430097 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.84 | 75.0 | 5.49e-01 | 94.3% | 94.5% |
| 3590548 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.84 | 73.0 | 5.56e-01 | 92.4% | 98.7% |
| 4030833 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.82 | 72.0 | 5.50e-01 | 93.3% | 99.6% |
| 4032871 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.81 | 64.0 | 5.72e-01 | 81.9% | 80.0% |
| 3198071 | 2006.1.1.22 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PGP_phosphatase | 0.81 | 64.0 | 4.71e-01 | 83.8% | 60.6% |
| 3287843 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.80 | 71.0 | 5.49e-01 | 94.3% | 98.1% |
| 3179404 | 2006.1.1.22 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PGP_phosphatase | 0.79 | 62.0 | 4.98e-01 | 82.9% | 64.5% |
| 142836 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.79 | 69.0 | 5.26e-01 | 93.3% | 99.1% |
| 5030059 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.79 | 73.0 | 6.19e-01 | 100.0% | 92.7% |
| 4947817 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.78 | 68.0 | 5.23e-01 | 94.3% | 98.7% |
| 5058181 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.77 | 67.0 | 5.58e-01 | 94.3% | 96.6% |
| 4011755 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.75 | 54.0 | 5.05e-01 | 75.2% | 100.0% |
| 4606076 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.64 | 44.0 | 4.53e-01 | 95.2% | 75.5% |
| 5001772 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.63 | 54.0 | 3.85e-01 | 93.3% | 63.9% |
| 3587073 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.61 | 53.0 | 4.40e-01 | 95.2% | 95.3% |
| 4937549 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 49.0 | 4.09e-01 | 87.6% | 76.2% |
| 4984223 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 47.0 | 3.97e-01 | 81.9% | 88.8% |
| 134055 | 2003.1.1.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 | 0.60 | 54.0 | 4.12e-01 | 99.0% | 91.3% |
| 3270833 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.59 | 50.0 | 4.55e-01 | 94.3% | 86.9% |
| 4971065 | 7597.1.1.0 ↗ | a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain | 0.59 | 44.0 | 4.67e-01 | 94.3% | 91.1% |
| 3219507 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.59 | 45.0 | 3.93e-01 | 82.9% | 97.0% |
| 4312312 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.59 | 49.0 | 4.62e-01 | 94.3% | 76.0% |
| 5027298 | 7566.1.1.2 ↗ | a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N | 0.58 | 52.0 | 4.14e-01 | 100.0% | 73.0% |
| 4929926 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.58 | 49.0 | 4.59e-01 | 94.3% | 87.4% |
| 5037812 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.58 | 49.0 | 3.80e-01 | 92.4% | 93.6% |
| 4177261 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.58 | 49.0 | 3.77e-01 | 93.3% | 86.0% |
| 1627713 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.58 | 46.0 | 4.72e-01 | 85.7% | 97.0% |
| 3818658 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.57 | 47.0 | 4.38e-01 | 94.3% | 70.4% |
| 3906173 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.57 | 48.0 | 3.82e-01 | 93.3% | 84.5% |
| 5063159 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.57 | 47.0 | 3.61e-01 | 93.3% | 82.9% |
| 3478938 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.57 | 49.0 | 3.78e-01 | 95.2% | 46.4% |
| 5004671 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.56 | 47.0 | 3.48e-01 | 94.3% | 63.7% |
| 3849755 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 47.0 | 3.09e-01 | 94.3% | 20.9% |
| 5029045 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.56 | 46.0 | 3.73e-01 | 93.3% | 98.2% |
| 4210081 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.56 | 47.0 | 3.88e-01 | 94.3% | 50.5% |
| 3477317 | 7534.1.1.0 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase | 0.56 | 46.0 | 3.79e-01 | 92.4% | 85.7% |
| 3221957 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.55 | 50.0 | 3.45e-01 | 100.0% | 44.7% |
| 4580956 | 2484.1.1.222 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UPF0236 | 0.55 | 47.0 | 3.67e-01 | 94.3% | 78.3% |
| 3604530 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.55 | 46.0 | 4.03e-01 | 94.3% | 92.7% |
| 3625069 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.55 | 50.0 | 3.38e-01 | 100.0% | 42.6% |
| 3618864 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 47.0 | 3.75e-01 | 97.1% | 51.6% |
| 5076178 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.55 | 46.0 | 3.95e-01 | 95.2% | 92.6% |
| 1877721 | 7516.1.1.14 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I | 0.55 | 49.0 | 3.33e-01 | 100.0% | 42.9% |
| 4979280 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.55 | 46.0 | 4.06e-01 | 95.2% | 98.8% |
| 4990024 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.54 | 49.0 | 3.51e-01 | 100.0% | 51.3% |
| 4016190 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.54 | 47.0 | 4.02e-01 | 98.1% | 85.1% |
| 3343109 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 48.0 | 3.54e-01 | 100.0% | 81.4% |
| 3488433 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 46.0 | 3.87e-01 | 97.1% | 59.5% |
| 5048978 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.54 | 43.0 | 3.50e-01 | 90.5% | 96.3% |
| 4943673 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.53 | 44.0 | 3.44e-01 | 93.3% | 86.8% |
| 3639445 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.53 | 41.0 | 3.15e-01 | 83.8% | 62.0% |
| 3642000 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.53 | 46.0 | 3.47e-01 | 95.2% | 62.4% |
| 4973063 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.53 | 45.0 | 3.95e-01 | 95.2% | 97.5% |
| 3235509 | 3407.1.1.1 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › NOP5NT | 0.52 | 40.0 | 3.48e-01 | 82.9% | 70.0% |
| 377629 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.51 | 41.0 | 3.93e-01 | 87.6% | 90.8% |
| 3507902 | 2003.1.1.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored | 0.50 | 43.0 | 3.68e-01 | 99.0% | 93.0% |
| 4615071 | 6096.1.1.1 ↗ | a+b two layers › Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB › Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB › Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB › DUF3410 | 0.50 | 37.0 | 3.85e-01 | 78.1% | 90.0% |
D2
medium
residues 43-56_75-155
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gtiA01 | 3.30.160.820 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like | 0.71 | 28.0 | 3.40e-01 | 85.3% | 53.1% |
| 2qhpA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 47.0 | 3.32e-01 | 85.3% | 45.8% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 43.0 | 4.32e-01 | 75.8% | 91.6% |
| 2i5bA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 49.0 | 3.58e-01 | 98.9% | 65.1% |
| 6qm7J00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.56 | 43.0 | 3.47e-01 | 85.3% | 92.2% |
| 2zosB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 42.0 | 3.60e-01 | 82.1% | 96.9% |
| 2nn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 40.0 | 3.32e-01 | 76.8% | 95.9% |
| 2zvfA02 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.55 | 40.0 | 3.93e-01 | 76.8% | 80.2% |
| 2rbcA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 48.0 | 3.42e-01 | 100.0% | 46.1% |
| 2qlcA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.54 | 41.0 | 3.74e-01 | 80.0% | 65.1% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 47.0 | 3.29e-01 | 96.8% | 37.7% |
| 2ahuA02 | 3.40.1080.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase | 0.53 | 45.0 | 3.41e-01 | 94.7% | 84.3% |
| 3noyB02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.53 | 38.0 | 3.86e-01 | 87.4% | 75.8% |
| 6ro0B01 | 3.10.40.10 | Alpha Beta › Roll › Pertussis Toxin; Chain B, domain 1 › Aerolysin/Pertussis toxin (APT), N-terminal domain | 0.53 | 36.0 | 3.75e-01 | 94.7% | 77.9% |
| 4bndA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.52 | 43.0 | 3.67e-01 | 95.8% | 55.8% |
| 1fy2A00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 42.0 | 3.17e-01 | 86.3% | 58.6% |
| 3td9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 45.0 | 3.82e-01 | 94.7% | 81.5% |
| 5ysqB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 45.0 | 3.25e-01 | 98.9% | 45.4% |
| 1tltA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 41.0 | 3.25e-01 | 85.3% | 87.6% |
| 4kzpB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 42.0 | 3.14e-01 | 96.8% | 70.0% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4975223 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 51.0 | 3.44e-01 | 85.3% | 93.5% |
| 3196217 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 54.0 | 3.83e-01 | 94.7% | 44.4% |
| 4143666 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.62 | 56.0 | 4.09e-01 | 98.9% | 93.6% |
| 5064558 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.62 | 49.0 | 3.27e-01 | 85.3% | 36.5% |
| 4034138 | 7520.1.1.0 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like | 0.61 | 48.0 | 4.36e-01 | 85.3% | 79.7% |
| 3723542 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 51.0 | 4.64e-01 | 89.5% | 77.2% |
| 4944998 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 42.0 | 3.78e-01 | 80.0% | 54.4% |
| 5079606 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.59 | 49.0 | 4.10e-01 | 90.5% | 76.2% |
| 3982644 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.59 | 51.0 | 3.55e-01 | 96.8% | 39.1% |
| 3947601 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.58 | 51.0 | 3.55e-01 | 96.8% | 41.0% |
| 5022884 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 49.0 | 4.64e-01 | 94.7% | 76.5% |
| 5079980 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.57 | 39.0 | 3.16e-01 | 81.1% | 36.3% |
| 3728722 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 48.0 | 3.56e-01 | 92.6% | 39.2% |
| 5047179 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 49.0 | 3.59e-01 | 100.0% | 57.3% |
| 5075699 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 49.0 | 3.35e-01 | 100.0% | 45.1% |
| 3222006 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.55 | 41.0 | 4.03e-01 | 76.8% | 84.0% |
| 3988610 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.55 | 44.0 | 3.99e-01 | 87.4% | 66.2% |
| 5042738 | 2003.6.1.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Khk | 0.55 | 48.0 | 3.30e-01 | 100.0% | 47.6% |
| 4928422 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 47.0 | 3.31e-01 | 96.8% | 41.2% |
| 4962738 | 2003.6.1.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Khk | 0.54 | 47.0 | 3.25e-01 | 100.0% | 34.5% |
| 5029434 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.54 | 46.0 | 3.47e-01 | 95.8% | 82.4% |
| 4046575 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.53 | 43.0 | 4.06e-01 | 88.4% | 98.3% |
| 4032515 | 2003.1.7.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like | 0.53 | 45.0 | 3.37e-01 | 94.7% | 85.3% |
| 5050241 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.53 | 47.0 | 3.35e-01 | 100.0% | 58.3% |
| 4153860 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 44.0 | 4.04e-01 | 91.6% | 85.6% |
| 4952580 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.52 | 45.0 | 3.44e-01 | 98.9% | 65.8% |
| 3644667 | 7516.1.1.41 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase | 0.52 | 45.0 | 3.08e-01 | 94.7% | 33.4% |
| 4206587 | 2007.1.2.47 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DabA | 0.52 | 42.0 | 3.48e-01 | 88.4% | 62.3% |
| 4936361 | 2003.1.1.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 | 0.52 | 45.0 | 3.25e-01 | 100.0% | 63.9% |
| None | — | 0.52 | 45.0 | 3.11e-01 | 98.9% | 86.4% | |
| 5027215 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.52 | 45.0 | 3.14e-01 | 100.0% | 41.8% |
| None | — | 0.51 | 44.0 | 2.81e-01 | 95.8% | 27.3% | |
| 1145898 | 304.48.2.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › 'palm' domain in birnaviruse RNA-dependent RNA polymerase › Birna_RdRp_palm | 0.51 | 44.0 | 2.78e-01 | 95.8% | 26.7% |
| 4532389 | 4126.1.1.6 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA | 0.51 | 41.0 | 2.53e-01 | 91.6% | 90.7% |
| 5058682 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.51 | 42.0 | 3.32e-01 | 94.7% | 46.4% |
| 4990771 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.50 | 42.0 | 3.00e-01 | 94.7% | 44.3% |
| 4926919 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.50 | 43.0 | 3.06e-01 | 94.7% | 38.7% |
| 4658980 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.50 | 44.0 | 2.96e-01 | 100.0% | 54.9% |