Back to structures

DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00343

Bact-Vir

DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00343

Identity

Kingdom:
phage

Quality

93.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-82
PDB
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.57 34.0 3.37e-01 78.1% 55.1%
3llcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 37.0 2.58e-01 74.0% 43.7%
2dmwA01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.52 45.0 3.90e-01 98.6% 100.0%
3weeB03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.51 38.0 3.35e-01 84.9% 51.3%
1xjhA00 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.51 29.0 3.12e-01 100.0% 64.5%
2qlzA02 6.10.250.2960 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.50 27.0 2.64e-01 83.6% 41.9%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5053500 224.1.1.0 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.55 34.0 3.13e-01 91.8% 45.0%
4488950 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.55 44.0 2.59e-01 95.9% 39.5%
1145958 2484.1.1.2 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.53 37.0 2.91e-01 84.9% 31.2%
5042930 3563.1.1.1 alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC 0.51 35.0 2.55e-01 74.0% 33.9%
3332006 101.1.2.245 alpha arrays › HTH › HTH › winged helix domain › PORR 0.51 35.0 3.07e-01 74.0% 93.3%
4024082 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.51 38.0 2.58e-01 83.6% 82.1%