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DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00443

Bact-Vir

DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00443

Identity

Kingdom:
phage

Quality

67.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 38-90
PDB
Domain cluster: representative
CATH (96)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mmlF01 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.87 68.0 5.85e-01 83.0% 59.5%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.84 69.0 5.57e-01 88.7% 65.6%
1usmA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.82 69.0 6.01e-01 90.6% 67.5%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.81 73.0 5.82e-01 100.0% 96.0%
1b4bA00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.80 63.0 5.69e-01 84.9% 63.4%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.79 72.0 5.63e-01 100.0% 97.2%
1xxaC00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.79 62.0 5.53e-01 84.9% 63.0%
2zfzD00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.78 62.0 5.36e-01 84.9% 57.0%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.78 62.0 5.57e-01 88.7% 97.3%
4dw8A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.78 70.0 5.50e-01 100.0% 96.2%
3ldgA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.76 54.0 3.64e-01 86.8% 20.6%
1dcoA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.76 63.0 5.18e-01 94.3% 63.6%
3lduA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.75 54.0 3.73e-01 94.3% 22.8%
4zevA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.75 67.0 5.29e-01 100.0% 96.3%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 55.0 5.05e-01 79.2% 60.0%
6lpnA03 3.30.70.2190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 60.0 4.66e-01 88.7% 57.9%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 58.0 4.87e-01 84.9% 62.5%
2c5sA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.74 55.0 3.89e-01 81.1% 29.6%
7ahsA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 57.0 4.79e-01 84.9% 59.1%
2hf2B02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.72 63.0 5.07e-01 100.0% 97.2%
1wihA00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.72 60.0 5.21e-01 94.3% 85.7%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.72 63.0 5.37e-01 100.0% 65.5%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 53.0 4.77e-01 81.1% 63.5%
3gkuA03 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.71 61.0 5.59e-01 100.0% 73.2%
1x44A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 55.0 4.39e-01 84.9% 52.4%
1nrwA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.70 61.0 4.63e-01 100.0% 96.9%
1q36A01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.70 58.0 3.90e-01 92.5% 57.1%
3daoA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.70 60.0 4.82e-01 100.0% 95.4%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.70 50.0 4.49e-01 81.1% 55.4%
2cw8A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.69 60.0 4.21e-01 98.1% 38.5%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.69 55.0 4.73e-01 88.7% 55.3%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 52.0 4.45e-01 84.9% 66.7%
4fa8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 52.0 4.20e-01 84.9% 70.2%
5dx9A01 3.30.70.1020 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 0.68 57.0 5.26e-01 98.1% 95.8%
4mo0A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.68 51.0 4.51e-01 83.0% 63.3%
2dgtA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.68 51.0 4.58e-01 81.1% 89.0%
3hdiA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.67 51.0 3.44e-01 84.9% 35.6%
4erdA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 50.0 3.99e-01 81.1% 39.8%
1x19A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 57.0 4.07e-01 98.1% 35.0%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 60.0 4.04e-01 100.0% 43.6%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.67 56.0 5.22e-01 100.0% 80.0%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.66 57.0 4.07e-01 98.1% 42.5%
2y23A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 51.0 4.12e-01 84.9% 51.0%
2gjhA00 3.30.1070.20 Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › 0.66 53.0 5.24e-01 94.3% 84.2%
1jo0A00 3.30.110.60 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › YhbY-like 0.65 55.0 4.66e-01 100.0% 54.6%
7m0oA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.65 57.0 3.90e-01 100.0% 28.8%
2dltA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 53.0 4.27e-01 92.5% 49.1%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 46.0 4.38e-01 79.2% 84.8%
2hiyA02 3.30.70.1260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › bacterial protein sp0830 like 0.63 47.0 4.00e-01 81.1% 46.7%
1rq8A00 3.30.110.60 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › YhbY-like 0.63 52.0 4.46e-01 100.0% 55.2%
6vu9A02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.63 53.0 3.42e-01 100.0% 88.3%
2wb6A00 3.90.1150.90 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.63 55.0 4.35e-01 100.0% 90.4%
3grzB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 52.0 3.67e-01 100.0% 27.5%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.63 45.0 4.20e-01 79.2% 62.0%
4durB01 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.63 47.0 4.11e-01 81.1% 53.1%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.62 45.0 4.00e-01 79.2% 52.5%
3im8A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.62 47.0 4.26e-01 83.0% 63.0%
1lfpA03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.62 47.0 4.27e-01 84.9% 75.3%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 54.0 4.67e-01 100.0% 76.2%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 4.49e-01 100.0% 68.9%
2wk1A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 49.0 3.30e-01 100.0% 21.5%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 53.0 4.24e-01 100.0% 53.8%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 49.0 4.00e-01 92.5% 49.5%
6e4nA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.60 47.0 4.29e-01 88.7% 64.8%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 47.0 3.53e-01 96.2% 31.8%
3f6oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 53.0 4.45e-01 100.0% 60.4%
1g6sA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.60 49.0 3.42e-01 100.0% 26.0%
4qpkB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.59 51.0 3.88e-01 100.0% 71.6%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 52.0 4.38e-01 100.0% 66.7%
1bqnA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.59 46.0 3.88e-01 88.7% 66.0%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 47.0 3.63e-01 94.3% 64.4%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 52.0 4.29e-01 100.0% 64.6%
1xviA02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.59 48.0 4.10e-01 96.2% 97.9%
1zvpD00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.59 45.0 3.53e-01 90.6% 76.3%
1s48A04 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.59 46.0 3.67e-01 88.7% 66.7%
4aukA01 3.30.70.2810 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 41.0 3.79e-01 81.1% 60.8%
1rkiA01 3.30.70.1650 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › PDO, CxxC motif 0.58 43.0 3.71e-01 86.8% 48.5%
1wr8A02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.58 47.0 4.41e-01 98.1% 97.1%
4nnzA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.58 42.0 2.90e-01 81.1% 63.0%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.25e-01 100.0% 82.7%
2mobA00 3.90.56.10 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM 0.57 47.0 4.03e-01 98.1% 95.7%
1ct9A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.57 44.0 3.07e-01 88.7% 25.5%
1af5A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 48.0 3.75e-01 100.0% 58.7%
4lqbA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 42.0 3.28e-01 84.9% 33.1%
4bpe700 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.04e-01 100.0% 59.4%
5optn00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 50.0 4.16e-01 100.0% 71.0%
1tuwA00 3.30.70.1090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. 0.56 40.0 3.41e-01 81.1% 50.0%
5cemA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 43.0 3.91e-01 84.9% 80.8%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 41.0 3.75e-01 86.8% 84.0%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.55 45.0 3.80e-01 100.0% 53.2%
2gu0A02 3.30.428.20 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain 0.55 46.0 3.37e-01 98.1% 44.0%
2gqcA01 3.30.70.2080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 39.0 3.87e-01 86.8% 73.2%
7ylzA01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 41.0 2.73e-01 84.9% 19.7%
6vxwA00 3.30.30.10 Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like 0.52 40.0 3.81e-01 90.6% 81.8%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 44.0 3.76e-01 100.0% 62.4%
2gumA02 1.20.5.1890 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.51 36.0 3.00e-01 77.4% 95.0%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937732 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.89 72.0 5.94e-01 86.8% 68.9%
4069390 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.88 71.0 5.76e-01 86.8% 66.3%
3597826 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.87 70.0 4.70e-01 86.8% 25.9%
5033418 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.87 67.0 6.09e-01 88.7% 62.9%
4163010 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.87 70.0 5.66e-01 86.8% 62.1%
5070538 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.86 67.0 6.05e-01 88.7% 62.9%
3969148 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.86 71.0 5.55e-01 88.7% 60.0%
4891214 306.6.1.1 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › CT_C_D 0.86 67.0 5.43e-01 83.0% 50.0%
3688090 306.6.1.1 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › CT_C_D 0.85 66.0 5.41e-01 83.0% 56.7%
166981 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.84 69.0 5.57e-01 88.7% 65.6%
3953208 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.84 68.0 5.59e-01 88.7% 66.0%
3988081 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.83 65.0 5.71e-01 84.9% 57.7%
4381080 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.83 71.0 5.99e-01 92.5% 70.6%
5063401 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.83 64.0 5.85e-01 88.7% 63.8%
5079841 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.82 63.0 5.61e-01 88.7% 58.7%
5060909 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.82 61.0 5.55e-01 79.2% 60.0%
3586974 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.82 64.0 5.60e-01 84.9% 57.0%
4119008 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.82 66.0 5.43e-01 88.7% 65.3%
3287406 306.6.1.1 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › CT_C_D 0.81 63.0 5.42e-01 83.0% 56.2%
4134167 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.81 74.0 4.54e-01 100.0% 37.5%
5004123 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.81 60.0 5.25e-01 88.7% 53.8%
3708707 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.81 73.0 4.48e-01 100.0% 37.0%
2076029 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.81 73.0 5.80e-01 100.0% 95.1%
3639504 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.80 69.0 5.37e-01 94.3% 60.0%
4522578 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.80 73.0 5.65e-01 100.0% 92.7%
3785854 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.80 64.0 5.04e-01 88.7% 67.0%
3174092 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.80 64.0 5.04e-01 88.7% 60.0%
4959531 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.80 56.0 5.21e-01 79.2% 60.0%
3592685 305.2.1.0 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.80 64.0 5.09e-01 88.7% 61.9%
3859647 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.79 58.0 5.32e-01 79.2% 60.0%
3184106 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.78 66.0 5.04e-01 94.3% 63.3%
4994261 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.77 58.0 4.97e-01 88.7% 51.2%
3435593 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.77 69.0 5.41e-01 100.0% 95.5%
4953585 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.77 58.0 5.22e-01 88.7% 58.7%
4060228 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.77 69.0 5.38e-01 100.0% 76.4%
4982161 309.1.1.15 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › DEAD_assoc 0.77 60.0 4.42e-01 84.9% 37.0%
4028358 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.76 65.0 5.41e-01 94.3% 67.8%
5057765 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.76 58.0 5.08e-01 83.0% 60.0%
3624653 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.76 56.0 5.06e-01 88.7% 57.3%
4152393 305.2.1.1 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a 0.76 68.0 5.39e-01 100.0% 76.2%
4990535 305.2.1.2 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › DUF2067 0.75 57.0 5.37e-01 88.7% 67.7%
3591488 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.75 56.0 5.01e-01 88.7% 57.3%
4993815 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 59.0 5.02e-01 84.9% 55.3%
3593012 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.75 55.0 4.99e-01 88.7% 57.3%
3668421 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.74 66.0 4.27e-01 100.0% 44.3%
5039768 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.74 55.0 4.95e-01 81.1% 61.3%
3624413 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.73 63.0 5.97e-01 100.0% 84.6%
3579956 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.72 63.0 5.80e-01 100.0% 85.7%
5051872 873.1.1.12 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313 0.72 62.0 4.79e-01 98.1% 65.8%
4235299 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.72 63.0 4.31e-01 100.0% 42.9%
4948690 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.72 60.0 3.59e-01 92.5% 14.2%
4945582 304.17.1.0 a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain 0.71 53.0 4.86e-01 81.1% 61.4%
3715563 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.71 51.0 4.76e-01 79.2% 60.0%
4122798 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.71 54.0 4.38e-01 84.9% 48.6%
5032337 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 53.0 4.72e-01 84.9% 61.3%
4993482 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 62.0 5.49e-01 98.1% 76.0%
3890741 320.1.1.7 a+b two layers › R3H domain-like › R3H domain › R3H domain › PUS7L_N 0.69 61.0 5.35e-01 100.0% 76.2%
3840730 320.1.1.7 a+b two layers › R3H domain-like › R3H domain › R3H domain › PUS7L_N 0.69 61.0 5.31e-01 100.0% 80.0%
3320247 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.69 51.0 4.25e-01 81.1% 45.3%
1820957 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.68 60.0 4.39e-01 98.1% 47.4%
5556 242.1.1.4 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › Endonuc_subdom 0.68 52.0 4.29e-01 84.9% 59.2%
3314359 320.1.1.11 a+b two layers › R3H domain-like › R3H domain › R3H domain › PF27261 0.68 59.0 5.29e-01 100.0% 70.7%
4934080 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 49.0 3.65e-01 88.7% 28.7%
4043156 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.67 55.0 4.65e-01 98.1% 54.4%
3976762 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.67 49.0 4.41e-01 79.2% 85.3%
3781365 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.67 56.0 5.09e-01 98.1% 100.0%
3698585 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.67 57.0 5.03e-01 100.0% 65.0%
3262615 206.1.1.49 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF5898 0.67 53.0 3.80e-01 88.7% 78.8%
2800426 327.16.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N 0.66 50.0 4.73e-01 90.6% 67.7%
3578641 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.66 49.0 4.53e-01 81.1% 62.9%
4335480 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.66 58.0 3.95e-01 100.0% 59.0%
5047872 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.66 50.0 4.73e-01 88.7% 69.2%
5049234 2.1.1.374 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2110_C 0.66 49.0 3.45e-01 81.1% 26.1%
4965231 304.24.1.2 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 0.65 48.0 4.40e-01 79.2% 78.6%
3604327 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 54.0 4.04e-01 100.0% 37.7%
5309 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.65 50.0 3.47e-01 86.8% 25.0%
5046695 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 49.0 4.36e-01 96.2% 56.2%
4666955 328.6.1.0 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like 0.64 56.0 3.82e-01 100.0% 58.5%
3716821 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.64 53.0 4.84e-01 100.0% 73.3%
4496530 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.64 50.0 4.29e-01 98.1% 51.6%
4096786 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.63 55.0 3.62e-01 100.0% 23.6%
3513333 304.110.1.3 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Prp3_C 0.63 48.0 3.66e-01 84.9% 46.7%
3494477 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.63 50.0 4.71e-01 88.7% 72.3%
5076264 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.63 48.0 4.57e-01 94.3% 70.8%
5022487 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 44.0 4.34e-01 79.2% 71.2%
4955390 304.24.1.39 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 0.62 54.0 4.09e-01 100.0% 60.0%
3667726 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.62 53.0 4.34e-01 98.1% 66.0%
3299123 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.61 45.0 3.83e-01 81.1% 48.9%
4302858 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.60 51.0 4.76e-01 100.0% 82.9%
5051945 210.1.3.4 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.60 43.0 2.92e-01 79.2% 21.4%
3339656 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.58 43.0 3.80e-01 83.0% 51.8%
3726455 207.1.1.288 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF29466 0.58 49.0 2.91e-01 100.0% 13.0%
3314328 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.58 42.0 3.60e-01 81.1% 46.3%
3489258 306.8.1.0 a+b two layers › Glucose permease domain IIB-like › TM1457-like › TM1457-like 0.58 49.0 4.01e-01 96.2% 48.6%
3496306 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 43.0 4.02e-01 84.9% 64.3%
2431073 304.137.1.3 a+b two layers › Alpha-beta plaits › NOL1/NOP2/sun N-terminal ferredoxin-like domain › NOL1/NOP2/sun N-terminal ferredoxin-like domain › RsmF-B_ferredox 0.56 41.0 3.73e-01 81.1% 58.7%
5082092 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.55 44.0 3.03e-01 96.2% 25.5%
4936288 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.54 38.0 3.71e-01 81.1% 68.3%
3352545 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.51 39.0 3.30e-01 86.8% 65.3%