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DNA-binding_packing_protein
Euk-VirShrimp_hemocyte_iridescent_virus
DNA-binding_packing_protein__YP_010084754__Shrimp_hemocyte_iridescent_virus__2039780
Identity
- Accession:
- YP_010084754 ↗
- Protein ID:
- DNA-binding_packing_protein
- Kingdom:
- euk
Quality
66.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Decapodiridovirus›
Shrimp_hemocyte_iridescent_virus
TaxID: 2039780
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-133
D2
high
residues 179-204_279-360
Domain cluster:
rep: 45.4_DNA_replication_factor__YP_762384__Spodoptera_frugiperda_ascovirus_1a__113370__D312-388
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04947.20 best | Pox_VLTF3 | 57.5 | 2.00e-15 | 75.9% | 45.8% |
D3
high
residues 206-272
Domain cluster:
rep: late_transcription_factor_VLTF3__YP_008052476__Phaeocystis_globosa_virus__251749__D211-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04947.20 best | Pox_VLTF3 | 50.6 | 2.60e-13 | 100.0% | 34.5% |