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DNA-dependent_RNA_polymerase_subunit_rpo30
Euk-VirVaccinia_virus
DNA-dependent_RNA_polymerase_subunit_rpo30__YP_232942__Vaccinia_virus__10245
Identity
- Accession:
- YP_232942 ↗
- Protein ID:
- DNA-dependent_RNA_polymerase_subunit_rpo30
- Kingdom:
- euk
Quality
65.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Orthopoxvirus›
Orthopoxvirus_vaccinia
TaxID: 10245
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-138
Domain cluster:
rep: transcription_factor_S-II_-TFIIS-_E4L__YP_009162443__Salmon_gill_poxvirus__1680908__D10-135
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12410.15 best | rpo30_N | 183.1 | 3.10e-54 | 92.8% | 86.7% |
D2
high
residues 144-194
Domain cluster:
rep: putative_transcription_elongation_factor_S-II-related_protein__YP_009507517__Heterosigma_akashiwo_virus_01__97195__D153-194
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01096.24 best | Zn_ribbon_TFIIS | 55.8 | 4.30e-15 | 74.5% | 94.9% |