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DNA-directed_RNA_polymerase

Euk-Vir

Heliothis_virescens_ascovirus_3g

DNA-directed_RNA_polymerase__YP_009701667__Heliothis_virescens_ascovirus_3g__1246651

Identity

Accession:
YP_009701667 ↗
Protein ID:
DNA-directed_RNA_polymerase
Kingdom:
euk

Quality

71.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Ascoviridae› Ascovirus› Heliothis_virescens_ascovirus_3g

TaxID: 1246651

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 74-206
PDB
Domain cluster: rep: DNA-directed_RNA_polymerase_II_largest_subunit__YP_010084808__Shrimp_hemocyte_iridescent_virus__2039780__D81-188
D2 high residues 499-633
PDB
Domain cluster: rep: putative_DNA_directed_RNA_polymerase_largest_subunit__YP_009052394__Aureococcus_anophagefferens_virus__1474867__D487-612
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04983.24 best RNA_pol_Rpb1_3 45.0 1.50e-11 100.0% 84.0%
D3 medium residues 1-25_37-71
PDB
D4 medium residues 207-217_237-315
PDB
D5 medium residues 344-411
PDB
Domain cluster: rep: 98.4_kDA_DNA-directed_RNA_polymerase__YP_762363__Spodoptera_frugiperda_ascovirus_1a__113370__D365-429
D6 medium residues 412-492
PDB
Domain cluster: rep: MF285618.1__ATA65434.1__2050HW_00099__00099__D155-180_216-261
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00623.26 best RNA_pol_Rpb1_2 99.3 4.00e-28 87.6% 41.0%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1twfA03 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.95 84.0 7.70e-01 92.6% 76.2%
7eu1A01 1.10.274.100 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 0.92 87.0 7.02e-01 100.0% 59.2%
1ynjD04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.92 80.0 6.39e-01 91.4% 79.3%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.79 53.0 4.81e-01 74.1% 52.8%
1aw8B00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.77 52.0 4.99e-01 74.1% 61.5%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.62 42.0 4.24e-01 70.4% 71.1%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.62 42.0 4.30e-01 70.4% 72.2%
6dgiA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.61 37.0 4.00e-01 70.4% 72.1%
1vx4404 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 41.0 3.42e-01 76.5% 49.3%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.56 37.0 4.14e-01 77.8% 91.7%
3rgzA02 3.30.1490.310 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.55 36.0 4.01e-01 72.8% 90.2%
1pbuA00 3.30.70.1010 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation elongation factor EF1B, gamma chain, conserved domain 0.55 48.0 3.87e-01 100.0% 72.8%
2bwqA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.55 39.0 3.45e-01 76.5% 75.4%
4mjjA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 39.0 3.51e-01 76.5% 74.1%
3kalB05 3.30.1490.50 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Glutathione synthase lid domain 0.54 33.0 3.68e-01 80.2% 81.4%
4iyqA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 3.95e-01 87.7% 98.1%
2b3rA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 39.0 3.39e-01 77.8% 77.4%
3fdwA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 38.0 3.33e-01 77.8% 74.6%
2xzmE02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.52 37.0 3.56e-01 75.3% 92.6%
2hfqA00 3.10.510.10 Alpha Beta › Roll › NE1680-like fold › NE1680-like 0.51 40.0 4.03e-01 90.1% 91.8%
4nzdB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.40e-01 77.8% 72.5%
1pkpA02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.51 35.0 3.59e-01 70.4% 98.7%
3g7dA03 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 36.0 3.13e-01 74.1% 62.1%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 34.0 3.50e-01 70.4% 100.0%
3up1A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 36.0 3.33e-01 77.8% 58.7%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4809193 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.96 80.0 8.36e-01 85.2% 93.2%
3509068 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.96 88.0 6.30e-01 95.1% 39.0%
3670775 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.96 92.0 7.85e-01 100.0% 69.2%
5081033 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.96 92.0 6.60e-01 100.0% 41.5%
3596090 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.96 92.0 7.83e-01 100.0% 69.2%
5058903 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.95 92.0 6.65e-01 100.0% 43.7%
4948679 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.95 91.0 5.78e-01 100.0% 25.5%
4943460 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.95 91.0 6.66e-01 100.0% 44.9%
4015760 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.95 91.0 6.54e-01 100.0% 42.6%
3684523 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.95 90.0 7.57e-01 100.0% 66.4%
3698542 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.94 90.0 6.43e-01 100.0% 41.0%
3836120 275.1.1.1 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_2 0.94 90.0 6.52e-01 100.0% 43.1%
3360997 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.94 90.0 7.14e-01 100.0% 70.3%
3374701 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.94 90.0 6.64e-01 100.0% 46.7%
4026183 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.93 88.0 6.95e-01 100.0% 80.0%
4886549 275.1.1.1 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_2 0.93 88.0 6.87e-01 100.0% 78.1%
3966248 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.93 88.0 7.66e-01 100.0% 73.9%
4129914 1.1.2.31 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2, RNA_pol_Rpb1_3 0.92 87.0 6.18e-01 100.0% 56.3%
4887355 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.92 79.0 6.69e-01 90.1% 61.3%
1746098 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.92 87.0 6.59e-01 100.0% 73.8%
4890084 1.1.2.31 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2, RNA_pol_Rpb1_3 0.86 82.0 6.94e-01 100.0% 71.3%
3696793 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.76 61.0 5.44e-01 86.4% 67.8%
3219557 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 52.0 5.89e-01 77.8% 96.7%
3187087 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.72 64.0 5.46e-01 96.3% 68.8%
4011478 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 63.0 5.51e-01 96.3% 69.2%
3183266 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.71 63.0 5.35e-01 97.5% 61.5%
3722909 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.69 60.0 5.04e-01 96.3% 57.0%
3274137 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.69 63.0 5.39e-01 100.0% 64.8%
3643011 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.69 61.0 5.18e-01 97.5% 60.8%
3357414 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.67 59.0 5.04e-01 97.5% 69.2%
3206565 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.66 58.0 3.68e-01 97.5% 19.8%
3772228 1.1.2.40 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PEX6_vert_N 0.63 56.0 4.83e-01 100.0% 76.9%
4048983 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.63 48.0 4.38e-01 80.2% 70.5%
3708577 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 48.0 4.00e-01 85.2% 53.1%
4429352 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 43.0 4.22e-01 82.7% 68.9%
4995699 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 41.0 4.38e-01 81.5% 85.7%
3958057 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 39.0 3.30e-01 70.4% 69.6%
4586356 220.1.1.81 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF2550 0.57 39.0 3.29e-01 70.4% 69.6%
3234107 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.57 40.0 4.26e-01 72.8% 82.9%
4252954 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 39.0 4.20e-01 80.2% 84.3%
4299932 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.57 39.0 4.24e-01 82.7% 89.2%
4476045 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 39.0 4.18e-01 76.5% 84.3%
4302032 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 38.0 4.16e-01 77.8% 87.7%
3649510 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.56 34.0 3.92e-01 80.2% 89.1%
4216845 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 38.0 4.00e-01 75.3% 79.5%
2640865 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 35.0 4.04e-01 77.8% 96.4%
3786134 11.1.1.646 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRP_N 0.55 40.0 3.36e-01 77.8% 62.8%
3987406 3115.6.1.1 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY 0.55 42.0 4.39e-01 85.2% 100.0%
4124780 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.55 38.0 3.95e-01 75.3% 79.5%
3515104 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 38.0 3.54e-01 71.6% 67.7%
4122525 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.53 38.0 3.92e-01 79.0% 81.3%
2546241 10.32.1.60 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TcA_TcB_BD 0.53 36.0 2.93e-01 72.8% 41.8%
4104821 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.52 37.0 3.87e-01 79.0% 81.3%
3898917 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.16e-01 76.5% 55.0%
3922151 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 36.0 3.46e-01 77.8% 65.0%
3405712 10.32.1.194 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › APD1-4_N 0.50 35.0 2.94e-01 74.1% 84.7%
D7 medium residues 649-717
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5uh5D02 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.83 74.0 5.85e-01 100.0% 53.6%
2v6eA01 1.10.287.3180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 56.0 5.44e-01 100.0% 73.3%
2xvtC00 1.10.150.510 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family 0.74 51.0 4.90e-01 100.0% 63.3%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.73 57.0 5.08e-01 87.0% 59.8%
4mk3A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.70 48.0 3.99e-01 78.3% 42.6%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.69 47.0 4.44e-01 73.9% 59.3%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.69 63.0 5.19e-01 98.6% 72.6%
8ek4A01 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.66 59.0 4.72e-01 98.6% 71.4%
1k32A03 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.65 39.0 3.94e-01 97.1% 56.9%
1wtyA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.63 51.0 4.30e-01 95.7% 52.6%
4qclA05 1.10.132.60 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain 0.63 55.0 4.08e-01 95.7% 93.5%
2fhxA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.62 41.0 2.77e-01 71.0% 19.2%
7ae2A01 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.61 54.0 4.30e-01 100.0% 49.6%
1st6A04 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.60 53.0 4.47e-01 100.0% 59.8%
2jexA01 1.10.287.30 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 0.60 46.0 4.13e-01 94.2% 59.4%
2np9A01 1.20.58.1300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 48.0 3.92e-01 92.8% 91.0%
4g3vA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.56 52.0 3.84e-01 100.0% 83.3%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.54 47.0 3.99e-01 98.6% 60.7%
2fonA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.53 47.0 3.83e-01 98.6% 76.7%
3k2nA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.51 48.0 3.46e-01 100.0% 82.5%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3331809 375.1.9.23 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › Sterile 0.92 64.0 4.60e-01 72.5% 30.3%
4101335 2006.1.4.8 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_5 0.88 69.0 4.67e-01 88.4% 25.3%
3590014 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.86 60.0 6.43e-01 72.5% 83.3%
5073213 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.82 71.0 4.89e-01 92.8% 48.6%
4964135 3843.1.1.4 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › PhaG_MnhG_YufB 0.79 55.0 4.87e-01 73.9% 55.0%
5023529 4958.1.1.4 ↗ a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.73 63.0 4.38e-01 100.0% 39.6%
4594465 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.72 57.0 5.10e-01 100.0% 61.1%
4975245 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.69 48.0 4.45e-01 73.9% 61.4%
3188064 605.1.1.133 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › OST3_OST6 0.68 58.0 4.76e-01 100.0% 52.0%
3946793 101.1.1.259 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 0.65 49.0 4.14e-01 94.2% 47.8%
3619816 2004.1.1.33 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind 0.64 59.0 3.89e-01 100.0% 32.8%
3697264 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.63 55.0 3.94e-01 98.6% 48.8%
3925075 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.62 44.0 4.44e-01 78.3% 74.3%
3273753 627.1.1.0 ↗ alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain 0.59 51.0 4.59e-01 100.0% 71.0%
4859812 304.48.1.7 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Flu_PB1 0.59 51.0 4.48e-01 100.0% 65.1%
4796713 4031.1.1.1 ↗ a+b three layers › Nigritoxin middle domain › Nigritoxin middle domain › Nigritoxin middle domain › Flagellin_N,Flagellin_C 0.58 51.0 4.27e-01 100.0% 71.7%
3477034 192.29.1.188 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › F_actin_bind 0.55 47.0 3.95e-01 97.1% 58.3%
3740666 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 42.0 2.92e-01 92.8% 91.6%