DNA-directed_RNA_polymerase_subunit_6

Euk-Vir

Acanthamoeba_polyphaga_mimivirus

DNA-directed_RNA_polymerase_subunit_6__YP_003986705__Acanthamoeba_polyphaga_mimivirus__212035

Identity

52.8 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Mimivirus› Acanthamoeba_polyphaga_mimivirus

TaxID: 212035

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 164-291

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01192.28 best	RNA_pol_Rpb6	34.0	3.40e-08	42.2%	96.2%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4bzaA01	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.64	24.0	3.21e-01	75.8%	63.2%
6m36O01	3.30.565.10	Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain	0.50	28.0	3.16e-01	74.2%	71.9%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3615458	152.1.1.1 ↗	alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6	0.90	66.0	7.68e-01	75.8%	100.0%
4877200	152.1.1.1 ↗	alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6	0.89	64.0	6.97e-01	73.4%	89.0%
5016746	3290.1.1.1 ↗	alpha complex topology › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › FeoB_Cyto	0.52	37.0	4.11e-01	75.8%	93.0%