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DNA-directed_RNA_polymerase_subunit_alpha
Euk-VirMarseillevirus_marseillevirus
DNA-directed_RNA_polymerase_subunit_alpha__YP_003406800__Marseillevirus_marseillevirus__694581
Identity
- Accession:
- YP_003406800 ↗
- Protein ID:
- DNA-directed_RNA_polymerase_subunit_alpha
- Kingdom:
- euk
Quality
73.9
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Marseillevirus_marseillevirus
TaxID: 694581
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-114_154-233
Domain cluster:
rep: DNA-directed_RNA_polymerase_subunit_alpha__YP_009094548__Melbournevirus__1560514__D74-162_215-266
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04983.24 best | RNA_pol_Rpb1_3 | 74.1 | 1.70e-20 | 99.4% | 93.2% |
D2
high
residues 241-375
Domain cluster:
rep: IMGVR_UViG_3300026526_001751-3300026526-Ga0256869_10341511__D627-809
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05000.23 best | RNA_pol_Rpb1_4 | 64.4 | 1.20e-17 | 86.7% | 87.8% |
D3
high
residues 436-536
Domain cluster:
rep: RNA_polymerase_RPB1_large_subunit__YP_009345156__Noumeavirus__1955558__D935-1023
D4
medium
residues 608-647_694-793
D5
medium
residues 900-979