DNA-helicase

Euk-Vir

Mocis_latipes_granulovirus

DNA-helicase__YP_009249921__Mocis_latipes_granulovirus__2072024

Identity

78.5 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Mocis_latipes_granulovirus

TaxID: 2072024

View cluster (45 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 166-255

PDB

Domain cluster: rep: DNA_helicase__YP_009666413__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D195-285

D2 high residues 1056-1144

PDB

Domain cluster: rep: helicase__YP_009552640__Operophtera_brumata_nucleopolyhedrovirus__1046267__D1095-1177

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	38.5	4.00e-10	100.0%	7.6%

D3 medium residues 13-145

PDB

Domain cluster: rep: P143__YP_009116998__Pseudoplusia_includens_SNPV_IE__1592335__D21-65_78-129_154-167

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	64.6	5.50e-18	91.0%	8.5%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ed8A01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.59	26.0	3.22e-01	90.2%	64.0%
2zuoA09	2.30.30.570	Mainly Beta › Roll › SH3 type barrels. ›	0.58	23.0	3.27e-01	75.2%	76.2%
4dohE02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.55	25.0	2.84e-01	90.2%	53.8%
2k2dA00	2.20.28.10	Mainly Beta › Single Sheet › Rubrerythrin, domain 2 ›	0.54	21.0	3.25e-01	84.2%	95.7%
1w8kA02	3.50.4.10	Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor	0.50	29.0	3.14e-01	100.0%	67.3%
1x60A01	3.30.70.1070	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat	0.50	28.0	3.55e-01	74.4%	98.6%
2jmlA00	1.10.1660.10	Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 ›	0.50	24.0	3.00e-01	85.0%	72.8%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2756948	862.1.1.1 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S	0.64	56.0	5.05e-01	94.7%	84.1%
3258706	812.1.1.0 ↗	a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain	0.61	46.0	4.60e-01	78.2%	100.0%
4004207	11.1.4.76 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO_5th	0.61	26.0	3.29e-01	90.2%	65.0%
3987692	822.3.1.1 ↗	a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649	0.58	26.0	3.44e-01	90.2%	77.1%
5027909	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.52	22.0	3.09e-01	82.0%	83.3%
2775442	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.52	22.0	3.19e-01	89.5%	88.1%

D4 medium residues 285-429

PDB

Domain cluster: rep: DNA-helicase-2__YP_009182280__Diatraea_saccharalis_granulovirus__1675862__D269-385

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	40.1	1.40e-10	96.5%	10.0%

D5 medium residues 852-988

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	148.4	2.70e-43	100.0%	10.7%
PF19263.6	DUF5906	31.0	5.00e-07	81.0%	92.9%