←Back to structures
DNA_binding_protein
Euk-VirOdocoileus_adenovirus_1
DNA_binding_protein__YP_009414584__Odocoileus_adenovirus_1__78522
Identity
- Accession:
- YP_009414584 ↗
- Protein ID:
- DNA_binding_protein
- Kingdom:
- euk
Quality
87.0
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Barthadenovirus›
Odocoileus_adenovirus_1
TaxID: 78522
Cluster
View cluster (53 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 106-129_167-291
Domain cluster:
rep: DBP__YP_009162599__Skunk_adenovirus_PB1__1641642__D183-206_246-418
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03728.19 best | Viral_DNA_Zn_bi | 56.1 | 6.60e-15 | 44.3% | 68.4% |
| PF03728.19 | Viral_DNA_Zn_bi | 38.5 | 1.90e-09 | 40.3% | 42.9% |
D2
medium
residues 16-105_292-342
Domain cluster:
rep: single-stranded_DNA-binding_protein__YP_009109584__Simian_adenovirus_DM-2014__1560346__D107-191_400-428
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02236.24 best | Viral_DNA_bi | 88.5 | 4.50e-25 | 55.3% | 100.0% |
| PF03728.19 | Viral_DNA_Zn_bi | 26.3 | 1.20e-05 | 42.5% | 43.9% |