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DNA_helicase

Euk-Vir

Lonomia_obliqua_multiple_nucleopolyhedrovirus

DNA_helicase__YP_009666413__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394

Identity

Accession:: YP_009666413 ↗
Protein ID:: DNA_helicase
Kingdom:: euk

Quality

76.6 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Lonomia_obliqua_multiple_nucleopolyhedrovirus

TaxID: 134394

Cluster

View cluster (45 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55_92-105

PDB

Domain cluster: rep: helicase__YP_009666576__Oxyplax_ochracea_nucleopolyhedrovirus__2083176__D1-61_84-94

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	42.6	2.30e-11	95.7%	4.3%

D2 medium residues 106-194

PDB

Domain cluster: rep: helicase__YP_006607831__Apocheima_cinerarium_nucleopolyhedrovirus__307461__D33-112

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	83.4	1.10e-23	100.0%	7.6%

D3 medium residues 195-285

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	88.2	4.00e-25	100.0%	7.0%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4hkjD00	2.60.240.30	Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A ›	0.51	40.0	3.19e-01	84.6%	94.6%
2bvfA03	3.40.462.20	Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 ›	0.51	45.0	3.45e-01	98.9%	82.4%
2ylkA00	2.60.40.710	Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like	0.50	36.0	3.16e-01	75.8%	78.6%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4057017	223.1.1.0 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains	0.58	42.0	3.98e-01	74.7%	73.3%
4541077	3767.1.1.0 ↗	a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain	0.55	39.0	3.43e-01	75.8%	90.0%
5046641	210.1.3.0 ↗	a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases	0.52	40.0	3.35e-01	84.6%	89.7%
4019018	304.6.1.0 ↗	a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain	0.52	39.0	2.97e-01	84.6%	80.4%
3229667	304.6.1.0 ↗	a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain	0.51	45.0	3.15e-01	98.9%	72.3%
4978383	304.4.1.0 ↗	a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel	0.50	36.0	2.88e-01	74.7%	51.4%
4361789	3767.1.1.0 ↗	a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain	0.50	35.0	3.13e-01	72.5%	91.9%
3640407	304.6.1.0 ↗	a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain	0.50	44.0	3.02e-01	98.9%	42.6%
3941111	382.1.1.0 ↗	few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like	0.50	39.0	3.47e-01	83.5%	85.4%

D4 medium residues 313-440

PDB

Domain cluster: rep: helicase_1__YP_009011148__Mamestra_brassicae_multiple_nucleopolyhedrovirus__78219__D300-447

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	107.8	4.80e-31	100.0%	10.9%

D5 medium residues 601-668

PDB

Domain cluster: rep: helicase__YP_009118538__Condylorrhiza_vestigialis_MNPV__1592576__D600-658

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	74.8	4.60e-21	100.0%	5.4%

D6 medium residues 842-898_1061-1090

PDB

Domain cluster: rep: helicase__YP_008720025__Clostera_anastomosis_granulovirus_Henan__1986291__D754-824_981-1016

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	85.1	3.50e-24	66.7%	4.5%
PF04735.17	Baculo_helicase	29.5	2.20e-07	36.8%	2.4%

D7 medium residues 899-1060_1091-1105

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	221.7	2.10e-65	99.4%	13.2%

D8 medium residues 1114-1173_1191-1231

PDB

Domain cluster: rep: helicase__YP_009552640__Operophtera_brumata_nucleopolyhedrovirus__1046267__D1095-1177

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	76.5	1.40e-21	100.0%	8.5%