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DNA_helicase
Euk-VirAkhmeta_virus
DNA_helicase__YP_010085596__Akhmeta_virus__2200830
Identity
- Accession:
- YP_010085596 ↗
- Protein ID:
- DNA_helicase
- Kingdom:
- euk
Quality
86.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Orthopoxvirus›
Orthopoxvirus_akhmetapox
TaxID: 2200830
Cluster
View cluster (178 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 96-268
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04851.22 best | ResIII | 49.3 | 7.40e-13 | 85.0% | 84.8% |
| PF00270.36 | DEAD | 37.5 | 2.90e-09 | 84.4% | 85.0% |
D2
medium
residues 269-324
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cqyB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.70 | 54.0 | 3.81e-01 | 87.5% | 97.3% |
| 3pvlA01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.65 | 48.0 | 3.22e-01 | 78.6% | 91.3% |
| 4r16A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 44.0 | 3.18e-01 | 87.5% | 24.9% |
| 2hkeA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.57 | 50.0 | 3.47e-01 | 100.0% | 50.5% |
| 3hc1A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.55 | 41.0 | 2.70e-01 | 85.7% | 35.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 167754 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.71 | 55.0 | 3.34e-01 | 85.7% | 98.1% |
| 2883 | 3444.2.1.1 ↗ | alpha arrays › DP domain › XPC-binding domain and DDI helical domain › XPC-binding domain › XPC-binding | 0.62 | 42.0 | 4.26e-01 | 71.4% | 70.2% |
D3
medium
residues 325-461
Domain cluster:
rep: CPXV151_protein__NP_619934__Cowpox_virus__10243__D310-431