DNA_helicase

Euk-Vir

Murid_betaherpesvirus_1

DNA_helicase__YP_214105__Murid_betaherpesvirus_1__10366

Identity

73.8 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Muromegalovirus› Murid_betaherpesvirus_1

TaxID: 10366

View cluster (90 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 169-229

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2hzdA00	6.10.20.40	Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain	0.60	43.0	3.95e-01	77.0%	59.8%
3f8mA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.55	33.0	3.25e-01	100.0%	55.4%
6pe0E01	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.54	34.0	3.60e-01	88.5%	73.6%
1x3aA00	1.10.3970.10	Mainly Alpha › Orthogonal Bundle › BSD domain-like fold › BSD domain	0.54	41.0	3.63e-01	88.5%	92.0%
1ofcX04	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.52	35.0	3.22e-01	73.8%	53.2%
6rqxA02	1.10.390.10	Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2	0.51	37.0	2.60e-01	83.6%	25.6%
4f7aA00	1.25.40.390	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.50	40.0	2.46e-01	98.4%	76.9%

D2 medium residues 230-340_928-948

PDB

Domain cluster: rep: orf44__YP_009044426__Alcelaphine_gammaherpesvirus_2__138184__D131-155_234-288

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	196.0	1.30e-57	87.9%	14.0%

D3 medium residues 341-411_868-927

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	90.1	1.40e-25	54.2%	8.2%
PF02689.21	Herpes_Helicase	76.0	2.50e-21	49.6%	7.2%

D4 medium residues 412-476_496-512_844-867

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__NP_045354__Bovine_alphaherpesvirus_1__10320__D392-469_736-760

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	65.8	3.00e-18	79.2%	9.9%

D5 medium residues 513-528_765-843

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009137079__Human_alphaherpesvirus_1__10298__D496-518_696-779

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	68.9	3.60e-19	83.2%	9.7%

D6 medium residues 529-595_710-764

PDB

Domain cluster: rep: helicase-primase_subunit__YP_009042021__Bovine_gammaherpesvirus_6__1504288__D477-585

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	59.4	2.60e-16	55.7%	8.0%
PF02689.21	Herpes_Helicase	44.4	8.80e-12	50.0%	6.8%