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DNA_ligase

Euk-Vir

Pseudalatia_unipuncta_granulovirus

DNA_ligase__YP_003422487__Pseudalatia_unipuncta_granulovirus__36355

Identity

Accession:
YP_003422487 ↗
Protein ID:
DNA_ligase
Kingdom:
euk

Quality

72.4 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Pseudalatia_unipuncta_granulovirus

TaxID: 36355

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 222-386
PDB
Domain cluster: rep: Salt_Pond_R1_B_H2O_MG_scaffold_1_prodigal-single.1__X__X__00295__D161-347
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF09414.16 best RNA_ligase 39.4 9.90e-10 92.1% 98.8%
PF01068.27 DNA_ligase_A_M 66.1 5.10e-18 54.5% 44.1%
PF01068.27 DNA_ligase_A_M 43.8 3.30e-11 46.1% 30.4%
D2 high residues 392-545
PDB
Domain cluster: rep: DNA_ligase_-2-__YP_010377156__Monkeypox_virus__10244__D413-557
D3 medium residues 12-195
PDB
Domain cluster: rep: DNA_ligase__YP_009329768__BeAn_58058_virus__67082__D5-155