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DNA_ligase

Euk-Vir

Artogeia_rapae_granulovirus

DNA_ligase__YP_003429426__Artogeia_rapae_granulovirus__362830

Identity

Accession:
YP_003429426 ↗
Protein ID:
DNA_ligase
Kingdom:
euk

Quality

75.7 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Betabaculovirus_arrapae

TaxID: 362830

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-169
PDB
Domain cluster: rep: DNA_ligase__YP_009329768__BeAn_58058_virus__67082__D5-155
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04675.20 best DNA_ligase_A_N 30.6 5.30e-07 94.0% 89.7%
D2 high residues 216-391
PDB
Domain cluster: rep: Salt_Pond_R1_B_H2O_MG_scaffold_1_prodigal-single.1__X__X__00295__D161-347
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF09414.16 best RNA_ligase 36.3 8.60e-09 91.5% 99.4%
PF01068.27 DNA_ligase_A_M 58.6 1.00e-15 55.7% 44.1%
PF01068.27 DNA_ligase_A_M 45.7 8.60e-12 45.5% 39.2%
D3 high residues 396-558
PDB
Domain cluster: rep: DNA_ligase_-2-__YP_010377156__Monkeypox_virus__10244__D413-557