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DNA_ligase

Euk-Vir

Cotia_virus_SPAn232

DNA_ligase__YP_005296337__Cotia_virus_SPAn232__930275

Identity

Accession:
YP_005296337 ↗
Protein ID:
DNA_ligase
Kingdom:
euk

Quality

89.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Oryzopoxvirus› Cotia_virus_SPAn232

TaxID: 930275

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 413-558
PDB
Domain cluster: rep: DNA_ligase_-2-__YP_010377156__Monkeypox_virus__10244__D413-557
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04679.22 best DNA_ligase_A_C 43.1 6.40e-11 74.7% 96.8%
D2 medium residues 1-55_159-199
PDB
Domain cluster: rep: dna_ligase__YP_009186741__Sucra_jujuba_nucleopolyhedrovirus__1563660__D117-198
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04675.20 best DNA_ligase_A_N 27.1 6.10e-06 93.8% 39.7%
D3 medium residues 56-158
PDB
Domain cluster: rep: DNA_ligase__YP_009506208__Trichoplusia_ni_granulovirus_LBIV-12__1916701__D77-175
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04675.20 best DNA_ligase_A_N 41.7 2.10e-10 100.0% 59.8%
D4 medium residues 200-234_356-406
PDB
Domain cluster: rep: ON649702__UVF62572.1__X__00095__D231-262_382-434
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01068.27 best DNA_ligase_A_M 33.7 4.20e-08 53.5% 22.1%
D5 medium residues 235-355
PDB
Domain cluster: rep: DNA_ligase-like_protein__YP_009408099__Eptesipox_virus__1329402__D250-350
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01068.27 best DNA_ligase_A_M 108.9 4.00e-31 100.0% 61.8%