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DNA_ligase

Euk-Vir

Plodia_interpunctella_granulovirus

DNA_ligase__YP_009330238__Plodia_interpunctella_granulovirus__262175

Identity

Accession:
YP_009330238 ↗
Protein ID:
DNA_ligase
Kingdom:
euk

Quality

72.9 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Plodia_interpunctella_granulovirus

TaxID: 262175

Cluster

View cluster (36 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-188
PDB
Domain cluster: rep: DNA_ligase__YP_009329768__BeAn_58058_virus__67082__D5-155
D2 high residues 215-384
PDB
Domain cluster: rep: Salt_Pond_R1_B_H2O_MG_scaffold_1_prodigal-single.1__X__X__00295__D161-347
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF09414.16 best RNA_ligase 46.2 7.80e-12 91.8% 100.0%
PF01068.27 DNA_ligase_A_M 58.8 8.70e-16 55.9% 44.1%
PF01068.27 DNA_ligase_A_M 50.2 3.80e-13 48.2% 41.2%
D3 high residues 395-533
PDB
Domain cluster: rep: DNA_ligase_-2-__YP_010377156__Monkeypox_virus__10244__D413-557