←Back to structures
DNA_packaging_protein_UL32
Euk-VirHuman_alphaherpesvirus_3
DNA_packaging_protein_UL32__NP_040149__Human_alphaherpesvirus_3__10335
Identity
- Accession:
- NP_040149 ↗
- Protein ID:
- DNA_packaging_protein_UL32
- Kingdom:
- euk
Quality
85.6
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Human_alphaherpesvirus_3
TaxID: 10335
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 48-65_87-215_358-396
Domain cluster:
rep: DNA_packaging_protein_UL32__YP_009176905__Testudinid_alphaherpesvirus_3__2560801__D32-61_81-232_316-336_452-482
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 223.7 | 7.60e-66 | 69.9% | 23.2% |
| PF01673.24 | Herpes_env | 41.1 | 1.70e-10 | 24.7% | 8.5% |
D2
medium
residues 216-237_257-290
Domain cluster:
rep: DNA_packaging_protein_UL32__YP_009042094__Fruit_bat_alphaherpesvirus_1__1343901__D234-284
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 58.8 | 7.20e-16 | 100.0% | 12.8% |
D3
medium
residues 291-357_397-511
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 187.9 | 5.40e-55 | 63.7% | 21.1% |
| PF01673.24 | Herpes_env | 64.7 | 1.10e-17 | 38.5% | 12.8% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.54 | 25.0 | 3.44e-01 | 70.9% | 88.2% |
| 5vjcA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 31.0 | 2.78e-01 | 74.7% | 37.4% |
| 3ztaA00 | 1.10.490.130 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.52 | 27.0 | 3.02e-01 | 84.6% | 62.6% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.51 | 28.0 | 3.46e-01 | 86.3% | 85.0% |
| 1e6bA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 27.0 | 3.25e-01 | 85.2% | 80.2% |
D4
medium
residues 512-585
Domain cluster:
rep: DNA_packaging_protein_UL32__YP_009042094__Fruit_bat_alphaherpesvirus_1__1343901__D516-583
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 124.7 | 7.60e-36 | 100.0% | 14.0% |