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DNA_packaging_protein_UL32
Euk-VirGallid_alphaherpesvirus_3
DNA_packaging_protein_UL32__NP_066864__Gallid_alphaherpesvirus_3__35250
Identity
- Accession:
- NP_066864 ↗
- Protein ID:
- DNA_packaging_protein_UL32
- Kingdom:
- euk
Quality
77.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
Gallid_alphaherpesvirus_3
TaxID: 35250
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-59_82-195_233-246_371-443
Domain cluster:
rep: DNA_packaging_protein_UL32__YP_009176905__Testudinid_alphaherpesvirus_3__2560801__D32-61_81-232_316-336_452-482
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 199.8 | 1.40e-58 | 61.7% | 27.2% |
| PF01673.24 | Herpes_env | 62.0 | 7.50e-17 | 38.7% | 14.0% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.52 | 25.0 | 3.33e-01 | 88.3% | 84.5% |
D2
medium
residues 315-330_444-626
Domain cluster:
rep: DNA_packaging_protein_UL32__YP_001033961__Gallid_alphaherpesvirus_2__10390__D336-344_456-640
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 300.7 | 3.60e-89 | 95.5% | 34.7% |