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DNA_packaging_protein_UL32
Euk-VirCanid_alphaherpesvirus_1
DNA_packaging_protein_UL32__YP_009252252__Canid_alphaherpesvirus_1__170325
Identity
- Accession:
- YP_009252252 ↗
- Protein ID:
- DNA_packaging_protein_UL32
- Kingdom:
- euk
Quality
87.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Canid_alphaherpesvirus_1
TaxID: 170325
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-50_72-190_326-367
Domain cluster:
rep: DNA_cleavage_packaging_protein__YP_009207093__Hawaiian_green_turtle_herpesvirus__70564__D1-103_380-397
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 182.6 | 2.20e-53 | 69.8% | 22.1% |
D2
medium
residues 191-221_248-273
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 28.3 | 1.30e-06 | 96.5% | 12.8% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5mmjb02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 43.0 | 4.52e-01 | 78.9% | 90.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5005286 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.64 | 56.0 | 3.55e-01 | 100.0% | 31.5% |
| 3692330 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 46.0 | 2.92e-01 | 94.7% | 24.9% |
D3
medium
residues 274-325_368-487
Domain cluster:
rep: DNA_packaging_protein_UL32__NP_040149__Human_alphaherpesvirus_3__10335__D291-357_397-511
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 174.5 | 6.00e-51 | 76.7% | 23.0% |
D4
medium
residues 488-559
Domain cluster:
rep: DNA_packaging_protein_UL32__YP_009042094__Fruit_bat_alphaherpesvirus_1__1343901__D516-583
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 102.9 | 3.00e-29 | 100.0% | 13.4% |