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DNA_packaging_protein
Euk-VirMacropodid_alphaherpesvirus_1
DNA_packaging_protein__YP_009227265__Macropodid_alphaherpesvirus_1__137443
Identity
- Accession:
- YP_009227265 ↗
- Protein ID:
- DNA_packaging_protein
- Kingdom:
- euk
Quality
85.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Macropodid_alphaherpesvirus_1
TaxID: 137443
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 34-58_95-209_225-247_259-284_356-390
Domain cluster:
rep: DNA_packaging_protein_UL32__YP_009176905__Testudinid_alphaherpesvirus_3__2560801__D32-61_81-232_316-336_452-482
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 238.5 | 2.50e-70 | 75.9% | 36.2% |
D2
medium
residues 285-355_391-503
Domain cluster:
rep: DNA_packaging_protein_UL32__NP_040149__Human_alphaherpesvirus_3__10335__D291-357_397-511
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 167.3 | 9.40e-49 | 63.0% | 20.8% |
| PF01673.24 | Herpes_env | 32.8 | 5.40e-08 | 39.7% | 14.1% |
D3
medium
residues 504-576
Domain cluster:
rep: DNA_packaging_protein_UL32__YP_009042094__Fruit_bat_alphaherpesvirus_1__1343901__D516-583
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 108.7 | 5.60e-31 | 100.0% | 13.8% |