DNA_packaging_tegument_protein_UL17

Euk-Vir

Gallid_alphaherpesvirus_3

DNA_packaging_tegument_protein_UL17__NP_066847__Gallid_alphaherpesvirus_3__35250

Identity

71.3 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Gallid_alphaherpesvirus_3

TaxID: 35250

View cluster (39 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-170_387-426

PDB

Domain cluster: rep: ORF32__YP_010084395__Retroperitoneal_fibromatosis-associated_herpesvirus__111469__D1-125_229-267

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04559.18 best	Herpes_UL17	120.6	1.20e-34	80.3%	25.3%

D2 medium residues 173-239_359-386

PDB

Domain cluster: rep: DNA_packaging_tegument_protein_UL17__NP_073310__Meleagrid_alphaherpesvirus_1__37108__D171-238_371-397

D3 medium residues 432-470

PDB

Domain cluster: rep: DNA_packaging_tegument_protein_UL17__NP_073310__Meleagrid_alphaherpesvirus_1__37108__D439-488

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3tw6A06	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.57	37.0	3.36e-01	71.8%	46.3%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4481623	304.1.1.1 ↗	a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C	0.57	44.0	2.99e-01	100.0%	35.7%
5029911	604.3.1.0 ↗	alpha bundles › Spectrin repeat-like › BAG domain › BAG domain	0.50	40.0	3.67e-01	100.0%	86.4%

D4 medium residues 600-715

PDB

Domain cluster: rep: DNA_packaging_tegument_protein__YP_009227250__Macropodid_alphaherpesvirus_1__137443__D518-541_577-686

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04559.18 best	Herpes_UL17	75.4	6.20e-21	83.6%	15.3%