DNA_packaging_tegument_protein_UL17

Euk-Vir

Equid_alphaherpesvirus_9

DNA_packaging_tegument_protein_UL17__YP_002333527__Equid_alphaherpesvirus_9__55744

Identity

77.0 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_9

TaxID: 55744

View cluster (39 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-159_394-413

PDB

Domain cluster: rep: ORF32__YP_010084395__Retroperitoneal_fibromatosis-associated_herpesvirus__111469__D1-125_229-267

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04559.18 best	Herpes_UL17	159.3	2.30e-46	89.4%	27.9%

D2 medium residues 160-241_349-393

PDB

Domain cluster: rep: DNA_packaging_tegument_protein_UL17__NP_045343__Bovine_alphaherpesvirus_1__10320__D182-272_357-377

D3 medium residues 434-488

PDB

Domain cluster: rep: DNA_packaging_tegument_protein_UL17__NP_045343__Bovine_alphaherpesvirus_1__10320__D416-466

D4 medium residues 489-515_549-585

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1imvA02	3.30.497.10	Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2	0.57	49.0	3.49e-01	100.0%	55.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3584686	219.1.1.1 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1	0.57	52.0	3.38e-01	100.0%	53.7%

D5 medium residues 516-548_586-701

PDB

Domain cluster: rep: DNA_packaging_tegument_protein__YP_009227250__Macropodid_alphaherpesvirus_1__137443__D518-541_577-686

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04559.18 best	Herpes_UL17	84.1	1.40e-23	87.9%	26.3%