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DNA_packaging_tegument_protein_UL17
Euk-VirWood_mouse_herpesvirus
DNA_packaging_tegument_protein_UL17__YP_010085907__Wood_mouse_herpesvirus__432370
Identity
- Accession:
- YP_010085907 ↗
- Protein ID:
- DNA_packaging_tegument_protein_UL17
- Kingdom:
- euk
Quality
65.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Rhadinovirus›
Wood_mouse_herpesvirus
TaxID: 432370
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-125
Domain cluster:
rep: ORF32__YP_010084395__Retroperitoneal_fibromatosis-associated_herpesvirus__111469__D1-125_229-267
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04559.18 best | Herpes_UL17 | 84.3 | 1.20e-23 | 99.2% | 27.3% |
CATH (77)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2if7B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.75 | 42.0 | 4.94e-01 | 83.2% | 78.2% |
| 4nzdB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 50.0 | 5.50e-01 | 84.0% | 90.9% |
| 2pn5A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.68 | 43.0 | 4.82e-01 | 87.2% | 82.3% |
| 2q7nA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 46.0 | 5.07e-01 | 87.2% | 86.1% |
| 3cu7A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.67 | 46.0 | 4.92e-01 | 84.8% | 82.1% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 41.0 | 4.83e-01 | 80.0% | 90.6% |
| 4oy7E00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.66 | 51.0 | 4.34e-01 | 87.2% | 51.3% |
| 5ftzA00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.66 | 49.0 | 4.37e-01 | 84.0% | 55.8% |
| 4ofyD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 44.0 | 4.70e-01 | 84.8% | 79.4% |
| 3sd2A01 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 36.0 | 4.43e-01 | 83.2% | 87.0% |
| 5lf5A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 42.0 | 4.74e-01 | 80.0% | 87.1% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 42.0 | 4.72e-01 | 84.8% | 86.3% |
| 2mklC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 42.0 | 4.53e-01 | 80.8% | 78.1% |
| 2cryA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 43.0 | 4.71e-01 | 87.2% | 83.3% |
| 5oyjC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 37.0 | 4.15e-01 | 80.0% | 73.7% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 43.0 | 4.60e-01 | 87.2% | 78.9% |
| 3pv7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 43.0 | 4.82e-01 | 79.2% | 90.4% |
| 2wngA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 44.0 | 4.76e-01 | 86.4% | 83.2% |
| 2oz4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 40.0 | 4.45e-01 | 84.0% | 80.4% |
| 1wfuA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 42.0 | 4.69e-01 | 86.4% | 87.4% |
| 3d85D02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 46.0 | 4.94e-01 | 82.4% | 88.7% |
| 4of8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 43.0 | 4.67e-01 | 84.0% | 83.5% |
| 1es0A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 41.0 | 4.50e-01 | 81.6% | 81.8% |
| 4q97A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 41.0 | 4.42e-01 | 80.8% | 76.9% |
| 3oq3B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 42.0 | 4.58e-01 | 83.2% | 82.5% |
| 1jz7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 46.0 | 4.82e-01 | 85.6% | 85.2% |
| 4q9cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 41.0 | 4.38e-01 | 84.8% | 79.0% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 40.0 | 4.37e-01 | 83.2% | 81.0% |
| 1w8oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 42.0 | 4.55e-01 | 88.0% | 84.3% |
| 1k8iB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 41.0 | 4.50e-01 | 88.0% | 85.9% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 40.0 | 4.38e-01 | 80.0% | 82.0% |
| 1a6aB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 40.0 | 4.41e-01 | 81.6% | 83.7% |
| 5eo9B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 41.0 | 4.41e-01 | 84.8% | 78.2% |
| 1l9mA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 46.0 | 4.47e-01 | 84.0% | 71.1% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 41.0 | 4.48e-01 | 84.8% | 83.7% |
| 2eefA01 | 2.60.40.2440 | Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain | 0.60 | 47.0 | 4.75e-01 | 82.4% | 94.5% |
| 4kkpA02 | 2.60.40.3880 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 43.0 | 4.47e-01 | 84.0% | 79.6% |
| 1kv3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 45.0 | 4.69e-01 | 85.6% | 84.6% |
| 3f62A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 42.0 | 4.54e-01 | 79.2% | 84.3% |
| 3f8uD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 42.0 | 4.52e-01 | 82.4% | 84.9% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 41.0 | 4.21e-01 | 83.2% | 72.1% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 39.0 | 4.30e-01 | 80.0% | 83.0% |
| 4q9bA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 39.0 | 4.24e-01 | 81.6% | 81.2% |
| 3u83A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 4.22e-01 | 87.2% | 81.2% |
| 4fomA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 4.19e-01 | 85.6% | 81.8% |
| 4gafB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 4.34e-01 | 84.8% | 81.8% |
| 5a2fA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 43.0 | 4.51e-01 | 87.2% | 84.8% |
| 3o4oC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 4.35e-01 | 84.0% | 83.6% |
| 1gyvA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.58 | 42.0 | 4.26e-01 | 87.2% | 78.3% |
| 7cymA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.57 | 39.0 | 4.32e-01 | 88.0% | 89.7% |
| 1bqsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 4.33e-01 | 81.6% | 80.7% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 45.0 | 4.50e-01 | 83.2% | 83.5% |
| 2x1wL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 38.0 | 4.16e-01 | 84.0% | 81.9% |
| 4frwA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 37.0 | 4.14e-01 | 87.2% | 85.4% |
| 2r39A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 40.0 | 4.29e-01 | 88.0% | 83.5% |
| 8dhaA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 37.0 | 4.26e-01 | 82.4% | 94.3% |
| 4a5wA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 40.0 | 4.28e-01 | 81.6% | 86.7% |
| 1kyfA01 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.57 | 41.0 | 4.01e-01 | 86.4% | 69.4% |
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 4.37e-01 | 87.2% | 86.5% |
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.56 | 40.0 | 4.18e-01 | 86.4% | 81.4% |
| 5wy8B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 38.0 | 4.06e-01 | 79.2% | 78.6% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 41.0 | 3.83e-01 | 78.4% | 61.7% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 26.0 | 3.53e-01 | 80.8% | 87.3% |
| 3b2dC00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 4.13e-01 | 86.4% | 74.1% |
| 2e56A00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 43.0 | 4.14e-01 | 87.2% | 73.6% |
| 4eeeA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 4.07e-01 | 83.2% | 80.9% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.54 | 38.0 | 3.95e-01 | 84.0% | 80.4% |
| 1m2vB02 | 2.60.40.1670 | Mainly Beta › Sandwich › Immunoglobulin-like › beta-sandwich domain of Sec23/24 | 0.53 | 42.0 | 3.86e-01 | 84.0% | 79.9% |
| 4of0A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.36e-01 | 87.2% | 87.9% |
| 4b60A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 42.0 | 3.93e-01 | 84.8% | 85.3% |
| 3winE03 | 2.60.120.1090 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 33.0 | 3.50e-01 | 96.0% | 70.9% |
| 3lsoA03 | 2.60.40.2260 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.86e-01 | 85.6% | 84.2% |
| 1a9xA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 38.0 | 3.11e-01 | 75.2% | 49.8% |
| 8gsxA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 3.83e-01 | 84.0% | 82.1% |
| 6lebA02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 38.0 | 3.74e-01 | 79.2% | 90.6% |
| 1n12A00 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.51 | 36.0 | 3.49e-01 | 72.8% | 82.6% |
| 4hsqA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 40.0 | 3.82e-01 | 84.8% | 87.5% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3902618 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 41.0 | 4.48e-01 | 87.2% | 68.6% |
| 3406851 | 11.1.1.239 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG3 | 0.69 | 44.0 | 4.93e-01 | 86.4% | 83.2% |
| 4941474 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 50.0 | 5.59e-01 | 88.0% | 100.0% |
| 3905148 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.67 | 43.0 | 4.87e-01 | 84.0% | 87.8% |
| 3408645 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.66 | 42.0 | 4.57e-01 | 80.8% | 76.2% |
| 5063417 | 11.1.1.236 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig | 0.66 | 42.0 | 4.73e-01 | 82.4% | 84.2% |
| 3749000 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.65 | 44.0 | 4.64e-01 | 87.2% | 75.7% |
| 3542371 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.65 | 41.0 | 4.57e-01 | 80.8% | 80.0% |
| 4470732 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.65 | 43.0 | 4.76e-01 | 81.6% | 85.0% |
| 3508837 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 44.0 | 5.06e-01 | 80.8% | 96.7% |
| 3290943 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 44.0 | 4.78e-01 | 81.6% | 84.8% |
| 5010853 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 48.0 | 4.93e-01 | 84.8% | 83.3% |
| 1300184 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.63 | 41.0 | 4.42e-01 | 80.8% | 76.9% |
| 3928533 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 48.0 | 4.93e-01 | 96.8% | 84.2% |
| 3872070 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.62 | 43.0 | 4.32e-01 | 85.6% | 70.4% |
| 3519306 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.62 | 44.0 | 4.69e-01 | 84.8% | 83.6% |
| 5080630 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 42.0 | 4.67e-01 | 81.6% | 87.0% |
| 3618173 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 48.0 | 4.74e-01 | 96.8% | 78.5% |
| 4998047 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 44.0 | 4.27e-01 | 83.2% | 66.2% |
| 3885349 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.61 | 41.0 | 4.44e-01 | 80.8% | 81.0% |
| 3511030 | 11.1.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 | 0.61 | 47.0 | 4.71e-01 | 87.2% | 80.0% |
| 3899364 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 42.0 | 4.46e-01 | 76.8% | 80.0% |
| 4002725 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.61 | 41.0 | 4.38e-01 | 81.6% | 80.0% |
| 5070269 | 11.1.1.138 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc | 0.61 | 41.0 | 4.54e-01 | 81.6% | 86.0% |
| 5080995 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 41.0 | 4.38e-01 | 85.6% | 81.0% |
| 3886724 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 41.0 | 4.37e-01 | 86.4% | 79.1% |
| 3477928 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 4.32e-01 | 85.6% | 67.6% |
| 5067790 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 44.0 | 4.56e-01 | 85.6% | 81.7% |
| 1220268 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.60 | 45.0 | 4.61e-01 | 83.2% | 83.1% |
| 4944071 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 44.0 | 4.61e-01 | 87.2% | 84.3% |
| 4001263 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 47.0 | 4.77e-01 | 84.8% | 84.0% |
| 417536 | 11.1.1.87 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TcpF | 0.60 | 51.0 | 5.02e-01 | 93.6% | 91.8% |
| 3784030 | 11.1.1.36 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rho_GDI | 0.60 | 47.0 | 4.32e-01 | 88.0% | 65.0% |
| 3898332 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 41.0 | 4.55e-01 | 81.6% | 89.0% |
| 5007009 | 11.1.1.138 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc | 0.59 | 41.0 | 4.33e-01 | 84.0% | 80.0% |
| 1500080 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.59 | 40.0 | 4.35e-01 | 87.2% | 83.3% |
| 3895205 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.59 | 44.0 | 4.55e-01 | 86.4% | 83.5% |
| 3390975 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.59 | 40.0 | 4.29e-01 | 82.4% | 79.1% |
| 4984487 | 11.1.1.138 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc | 0.59 | 41.0 | 4.40e-01 | 84.0% | 81.8% |
| 3940751 | 11.1.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 | 0.59 | 44.0 | 4.37e-01 | 84.0% | 73.9% |
| 4037721 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 41.0 | 4.59e-01 | 79.2% | 93.7% |
| 3883577 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 43.0 | 4.48e-01 | 85.6% | 82.6% |
| 3273974 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 42.0 | 4.51e-01 | 82.4% | 85.5% |
| 3572391 | 712.1.1.1 ↗ | beta sandwiches › ENV polyprotein, receptor-binding domain › ENV polyprotein, receptor-binding domain › ENV polyprotein, receptor-binding domain › TLV_coat | 0.58 | 47.0 | 4.13e-01 | 87.2% | 86.8% |
| 5062233 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 41.0 | 4.40e-01 | 82.4% | 85.7% |
| 3537321 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.58 | 37.0 | 4.12e-01 | 86.4% | 80.0% |
| 3245466 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.58 | 40.0 | 4.11e-01 | 88.0% | 71.8% |
| 3544974 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 42.0 | 4.40e-01 | 89.6% | 84.5% |
| 3893621 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.58 | 44.0 | 4.55e-01 | 84.8% | 84.2% |
| 3557043 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 41.0 | 4.07e-01 | 84.0% | 69.2% |
| 3764712 | 11.1.1.118 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Adhes-Ig_like | 0.58 | 42.0 | 4.22e-01 | 81.6% | 73.8% |
| 1487435 | 11.1.4.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CBM_20 | 0.58 | 47.0 | 4.52e-01 | 88.0% | 78.5% |
| 3401074 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.58 | 42.0 | 4.44e-01 | 82.4% | 83.5% |
| 3246557 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.58 | 42.0 | 4.38e-01 | 84.8% | 82.6% |
| 5012872 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 39.0 | 4.29e-01 | 80.8% | 87.0% |
| 5030168 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 41.0 | 4.15e-01 | 83.2% | 76.0% |
| 3498200 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 45.0 | 4.17e-01 | 84.8% | 85.0% |
| 3346450 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 4.54e-01 | 85.6% | 85.8% |
| 3478433 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 4.38e-01 | 82.4% | 83.1% |
| 4029291 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 4.53e-01 | 88.8% | 87.1% |
| 4049751 | 11.1.1.148 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FixG_C | 0.56 | 41.0 | 4.29e-01 | 88.0% | 83.5% |
| 392939 | 11.1.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 | 0.56 | 44.0 | 4.23e-01 | 87.2% | 73.6% |
| 3868241 | 11.1.5.95 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › TMEM132_3rd | 0.56 | 45.0 | 4.33e-01 | 87.2% | 85.5% |
| 3893730 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.56 | 37.0 | 4.09e-01 | 84.8% | 85.0% |
| 3205720 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 4.39e-01 | 85.6% | 82.2% |
| 3473930 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 45.0 | 4.58e-01 | 87.2% | 87.2% |
| 3502307 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 4.08e-01 | 85.6% | 68.7% |
| 3682235 | 2003.1.5.132 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PRMT_C | 0.55 | 41.0 | 2.74e-01 | 77.6% | 98.4% |
| 5058845 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 45.0 | 3.26e-01 | 88.8% | 38.1% |
| 3491554 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 4.09e-01 | 85.6% | 75.8% |
| 4942018 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 4.12e-01 | 87.2% | 82.7% |
| 3264442 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.55 | 44.0 | 3.78e-01 | 86.4% | 56.0% |
| 3922644 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 4.06e-01 | 83.2% | 74.6% |
| 3234410 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.54 | 43.0 | 4.10e-01 | 84.0% | 84.1% |
| 4014751 | 11.1.1.962 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7077 | 0.54 | 42.0 | 4.32e-01 | 82.4% | 85.8% |
| 3909881 | 11.1.5.95 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › TMEM132_3rd | 0.54 | 44.0 | 4.22e-01 | 88.0% | 84.8% |
| 4981128 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 4.15e-01 | 78.4% | 89.5% |
| 3203718 | 11.1.5.105 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7077 | 0.53 | 43.0 | 4.30e-01 | 86.4% | 85.6% |
| 3472118 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 4.17e-01 | 86.4% | 82.1% |
| 3831628 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 4.17e-01 | 88.8% | 85.5% |
| 4029347 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 3.78e-01 | 86.4% | 84.4% |
| 3586734 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.53 | 40.0 | 3.95e-01 | 80.8% | 81.5% |
| 3697748 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 3.90e-01 | 93.6% | 94.7% |
| 3854060 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 41.0 | 3.68e-01 | 84.8% | 87.8% |
| 3635518 | 11.1.1.962 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7077 | 0.52 | 40.0 | 4.09e-01 | 82.4% | 87.5% |
| 3896288 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.52 | 36.0 | 3.98e-01 | 94.4% | 91.0% |
| 4886831 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 3.85e-01 | 82.4% | 82.9% |
| 3591908 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 40.0 | 3.61e-01 | 84.8% | 80.0% |
| 3170835 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 38.0 | 3.66e-01 | 88.0% | 67.6% |
| 3390711 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 3.69e-01 | 79.2% | 72.3% |
| 3491699 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.90e-01 | 88.0% | 81.9% |
| 3492759 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.90e-01 | 88.0% | 81.3% |
| 3399517 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.50 | 38.0 | 3.89e-01 | 84.0% | 80.8% |
D2
high
residues 261-442
Domain cluster:
rep: DNA_packaging_tegument_protein_UL17__YP_009388533__Common_bottlenose_dolphin_gammaherpesvirus_1_strain_Sarasota__2022783__D344-532
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04559.18 best | Herpes_UL17 | 109.6 | 2.70e-31 | 87.9% | 33.1% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nbxX04 | 2.40.128.430 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 26.0 | 3.24e-01 | 83.0% | 75.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3199398 | 331.19.1.3 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › CPSF73-100_C | 0.56 | 21.0 | 3.11e-01 | 78.6% | 76.2% |
| 3306545 | 331.2.1.8 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C | 0.56 | 22.0 | 3.14e-01 | 78.6% | 75.3% |
| 3806422 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.56 | 22.0 | 3.16e-01 | 78.6% | 75.3% |
| 4668665 | 331.2.1.8 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C | 0.56 | 23.0 | 3.15e-01 | 78.6% | 74.4% |
| 3263502 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.55 | 23.0 | 3.18e-01 | 80.2% | 75.6% |
| 4968206 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.55 | 20.0 | 2.98e-01 | 76.4% | 71.8% |
| 4944335 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.53 | 21.0 | 2.95e-01 | 74.2% | 71.0% |
| 4947558 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.53 | 21.0 | 2.85e-01 | 76.9% | 68.9% |
| 3992640 | 331.10.2.7 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › CPSF73-100_C | 0.53 | 22.0 | 3.06e-01 | 78.6% | 76.7% |
| 4943458 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 35.0 | 4.00e-01 | 93.4% | 99.2% |