DNA_packaging_tegument_protein_UL17

Euk-Vir

Equid_alphaherpesvirus_1

DNA_packaging_tegument_protein_UL17__YP_053091__Equid_alphaherpesvirus_1__10326

Identity

78.2 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Equid_alphaherpesvirus_1

TaxID: 10326

View cluster (39 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-160_392-429

PDB

Domain cluster: rep: ORF32__YP_010084395__Retroperitoneal_fibromatosis-associated_herpesvirus__111469__D1-125_229-267

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04559.18 best	Herpes_UL17	161.6	4.70e-47	81.3%	28.1%
PF04559.18	Herpes_UL17	31.7	1.10e-07	20.2%	7.0%

D2 medium residues 162-265_355-391

PDB

D3 medium residues 434-467

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1vw4U00	3.30.1390.20	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7	0.68	45.0	3.39e-01	100.0%	26.8%
2z3xA00	6.10.10.80	Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like	0.62	49.0	4.28e-01	91.2%	64.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4433184	130.1.1.3 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N	0.55	47.0	4.00e-01	97.1%	74.5%

D4 medium residues 483-518_550-577_692-703

PDB

Domain cluster: rep: DNA_packaging_tegument_protein_UL17__YP_002333527__Equid_alphaherpesvirus_9__55744__D489-515_549-585

D5 medium residues 519-549_578-691

PDB

Domain cluster: rep: DNA_packaging_tegument_protein__YP_009227250__Macropodid_alphaherpesvirus_1__137443__D518-541_577-686

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04559.18 best	Herpes_UL17	91.1	1.10e-25	94.5%	25.9%