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DNA_packaging_tegument_protein_UL25
Euk-VirHuman_alphaherpesvirus_3
DNA_packaging_tegument_protein_UL25__NP_040157__Human_alphaherpesvirus_3__10335
Identity
- Accession:
- NP_040157 ↗
- Protein ID:
- DNA_packaging_tegument_protein_UL25
- Kingdom:
- euk
Quality
77.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Human_alphaherpesvirus_3
TaxID: 10335
Cluster
View cluster (77 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 228-376
Domain cluster:
rep: DNA_packaging_tegument_protein_UL25__YP_010085894__Wood_mouse_herpesvirus__432370__D202-318
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 168.3 | 3.80e-49 | 100.0% | 27.8% |
D2
medium
residues 27-108
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 53.5 | 2.20e-14 | 100.0% | 12.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5033256 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.75 | 56.0 | 4.40e-01 | 79.3% | 39.4% |
| 3191372 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.50 | 38.0 | 2.57e-01 | 80.5% | 22.7% |
D3
medium
residues 139-171_208-224
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kf6D00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.65 | 47.0 | 3.59e-01 | 78.0% | 79.8% |
D4
medium
residues 172-207_455-579
Domain cluster:
rep: DNA_packaging_tegument_protein_UL25__YP_001033953__Gallid_alphaherpesvirus_2__10390__D170-226_378-390_457-474_492-502_558-583
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 100.2 | 1.60e-28 | 64.6% | 17.5% |
| PF01499.22 | Herpes_UL25 | 40.6 | 1.80e-10 | 24.2% | 6.3% |