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DNA_packaging_tegument_protein_UL25
Euk-VirPsittacid_alphaherpesvirus_1
DNA_packaging_tegument_protein_UL25__NP_944397__Psittacid_alphaherpesvirus_1__50294
Identity
- Accession:
- NP_944397 ↗
- Protein ID:
- DNA_packaging_tegument_protein_UL25
- Kingdom:
- euk
Quality
71.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Iltovirus›
Psittacid_alphaherpesvirus_1
TaxID: 50294
Cluster
View cluster (77 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 245-267_280-418
Domain cluster:
rep: DNA_packaging_tegument_protein_UL25__YP_010085894__Wood_mouse_herpesvirus__432370__D202-318
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 170.4 | 9.10e-50 | 100.0% | 29.4% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oerA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 34.0 | 3.35e-01 | 93.2% | 61.5% |
| 3vkhA11 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.51 | 28.0 | 2.26e-01 | 95.1% | 24.8% |
| 3ontA00 | 6.10.140.1610 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 22.0 | 2.63e-01 | 88.3% | 57.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185949 | 3424.1.1.1 ↗ | alpha arrays › Virion protein UL25 › Virion protein UL25 › Virion protein UL25 › Herpes_UL25 | 0.91 | 79.0 | 5.62e-01 | 100.0% | 35.4% |
| 3577300 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.57 | 29.0 | 3.90e-01 | 95.1% | 100.0% |
| 3641319 | 621.1.1.1 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GBP_C | 0.55 | 27.0 | 2.75e-01 | 77.2% | 44.8% |
D2
medium
residues 189-240_517-627
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 76.4 | 2.60e-21 | 54.6% | 15.5% |
| PF01499.22 | Herpes_UL25 | 42.8 | 3.90e-11 | 32.5% | 8.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fkaG00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.56 | 36.0 | 3.96e-01 | 72.4% | 80.5% |
| 1u89A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.56 | 33.0 | 3.59e-01 | 73.0% | 67.6% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 31.0 | 3.22e-01 | 86.5% | 61.1% |
| 3hd6A00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.51 | 41.0 | 3.12e-01 | 95.7% | 34.5% |
| 1i5nB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.50 | 33.0 | 3.75e-01 | 73.6% | 87.1% |