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DNA_packaging_tegument_protein_UL25
Euk-VirGallid_alphaherpesvirus_2
DNA_packaging_tegument_protein_UL25__YP_001033953__Gallid_alphaherpesvirus_2__10390
Identity
- Accession:
- YP_001033953 ↗
- Protein ID:
- DNA_packaging_tegument_protein_UL25
- Kingdom:
- euk
Quality
71.9
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
Gallid_alphaherpesvirus_2
TaxID: 10390
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 47-112
Domain cluster:
rep: DNA_packaging_tegument_protein_UL25__NP_040157__Human_alphaherpesvirus_3__10335__D27-108
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 43.3 | 2.80e-11 | 100.0% | 10.6% |
D2
medium
residues 170-226_378-390_457-474_492-502_558-583
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 62.4 | 4.50e-17 | 52.8% | 9.4% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7p2yC03 | 1.20.150.20 | Mainly Alpha › Up-down Bundle › Lysin › ATP synthase alpha/beta chain, C-terminal domain | 0.65 | 36.0 | 3.65e-01 | 78.4% | 53.5% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.52 | 26.0 | 3.25e-01 | 90.4% | 77.9% |
D3
medium
residues 227-331_345-377
Domain cluster:
rep: DNA_packaging_tegument_protein_UL25__YP_010085894__Wood_mouse_herpesvirus__432370__D202-318
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 147.0 | 1.10e-42 | 100.0% | 28.1% |
D4
medium
residues 391-456
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 56.4 | 2.90e-15 | 100.0% | 12.8% |
D5
medium
residues 503-557
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01499.22 best | Herpes_UL25 | 47.6 | 1.40e-12 | 100.0% | 9.0% |